RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CPN2P22792 545 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 GRK2P25098 689 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 SERPINB3P29508 390 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 HNRNPFP52597 415 aaKnown RBP25.27■■□□□ 1.64
SSU72-201ENST00000291386 HNRNPH2P55795 449 aaKnown RBP25.27■■□□□ 1.64
SSU72-201ENST00000291386 CHAF1BQ13112 559 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 AIMP2Q13155 320 aaKnown RBP25.27■■□□□ 1.64
SSU72-201ENST00000291386 CHI3L2Q15782 390 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 HHATQ5VTY9 493 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 CLEC6AQ6EIG7 209 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 CYP20A1Q6UW02 462 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 LANCL3Q6ZV70 420 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 COMMD6Q7Z4G1 85 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 CLEC1AQ8NC01 280 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 C7orf57Q8NEG2 295 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 TUBB6Q9BUF5 446 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 NECTIN3Q9NQS3 549 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 RIC8BQ9NVN3 520 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 NKIRAS1Q9NYS0 192 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 TRAF6Q9Y4K3 522 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 CLDN16Q9Y5I7 305 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 UQCRHLA0A096LP55 91 aa25.26■■□□□ 1.63
SSU72-201ENST00000291386 NSG1A0A0A6YYJ2 146 aa25.26■■□□□ 1.63
SSU72-201ENST00000291386 NPIPB8E9PQR5 432 aa25.26■■□□□ 1.63
SSU72-201ENST00000291386 PROM1O43490 865 aa25.26■■□□□ 1.63
SSU72-201ENST00000291386 CTNSO60931 367 aa25.26■■□□□ 1.63
SSU72-201ENST00000291386 KLK1P06870 262 aa25.26■■□□□ 1.63
SSU72-201ENST00000291386 UQCRHP07919 91 aa25.26■■□□□ 1.63
SSU72-201ENST00000291386 FAM58BPP0C7Q3 252 aa25.26■■□□□ 1.63
SSU72-201ENST00000291386 EEF1A2Q05639 463 aaKnown RBP25.26■■□□□ 1.63
SSU72-201ENST00000291386 SPIN4Q56A73 249 aa25.26■■□□□ 1.63
SSU72-201ENST00000291386 CES4AQ5XG92 561 aa25.26■■□□□ 1.63
SSU72-201ENST00000291386 GOLGA6L1Q8N7Z2 621 aa25.26■■□□□ 1.63
SSU72-201ENST00000291386 EXD3Q8N9H8 876 aa25.26■■□□□ 1.63
SSU72-201ENST00000291386 C11orf24Q96F05 449 aaPredicted RBP25.26■■□□□ 1.63
SSU72-201ENST00000291386 IMMP1LQ96LU5 166 aa25.26■■□□□ 1.63
SSU72-201ENST00000291386 MLXIPLQ9NP71 852 aa25.26■■□□□ 1.63
SSU72-201ENST00000291386 ATG4BQ9Y4P1 393 aa25.26■■□□□ 1.63
SSU72-201ENST00000291386 PCDHGA9Q9Y5G4 932 aaKnown RBP25.26■■□□□ 1.63
SSU72-201ENST00000291386 HMGB1P1B2RPK0 211 aaPredicted RBP25.25■■□□□ 1.63
SSU72-201ENST00000291386 DNAJB5O75953 348 aa25.25■■□□□ 1.63
SSU72-201ENST00000291386 SFTPCP11686 197 aa25.25■■□□□ 1.63
SSU72-201ENST00000291386 MAOAP21397 527 aa25.25■■□□□ 1.63
SSU72-201ENST00000291386 HMGCS1Q01581 520 aa25.25■■□□□ 1.63
SSU72-201ENST00000291386 TNFRSF17Q02223 184 aa25.25■■□□□ 1.63
SSU72-201ENST00000291386 KCNAB2Q13303 367 aa25.25■■□□□ 1.63
SSU72-201ENST00000291386 UGT3A2Q3SY77 523 aa25.25■■□□□ 1.63
SSU72-201ENST00000291386 C1orf52Q8N6N3 182 aaKnown RBP25.25■■□□□ 1.63
SSU72-201ENST00000291386 EFCAB3Q8N7B9 438 aa25.25■■□□□ 1.63
SSU72-201ENST00000291386 METTL2AQ96IZ6 378 aaKnown RBP25.25■■□□□ 1.63
SSU72-201ENST00000291386 WDR77Q9BQA1 342 aaPredicted RBP25.25■■□□□ 1.63
SSU72-201ENST00000291386 CCL27Q9Y4X3 112 aa25.25■■□□□ 1.63
SSU72-201ENST00000291386 DNAJC15Q9Y5T4 150 aa25.25■■□□□ 1.63
SSU72-201ENST00000291386 MKRN2OSH3BPM6 223 aa25.24■■□□□ 1.63
SSU72-201ENST00000291386 RSL1D1O76021 490 aaKnown RBP25.24■■□□□ 1.63
SSU72-201ENST00000291386 CHEK2O96017 543 aa25.24■■□□□ 1.63
SSU72-201ENST00000291386 FAM87AP0C7U9 286 aa25.24■■□□□ 1.63
SSU72-201ENST00000291386 PRPH2P23942 346 aa25.24■■□□□ 1.63
SSU72-201ENST00000291386 TLX1P31314 330 aaPredicted RBP25.24■■□□□ 1.63
SSU72-201ENST00000291386 BUD31P41223 144 aaPredicted RBP25.24■■□□□ 1.63
SSU72-201ENST00000291386 CCL11P51671 97 aa25.24■■□□□ 1.63
SSU72-201ENST00000291386 ABCE1P61221 599 aaKnown RBP25.24■■□□□ 1.63
SSU72-201ENST00000291386 TRA2BP62995 288 aaKnown RBP25.24■■□□□ 1.63
SSU72-201ENST00000291386 SFT2D3Q587I9 215 aa25.24■■□□□ 1.63
SSU72-201ENST00000291386 CCNYL2Q5T2Q4 361 aa25.24■■□□□ 1.63
SSU72-201ENST00000291386 GALNT18Q6P9A2 607 aa25.24■■□□□ 1.63
SSU72-201ENST00000291386 SCIMPQ6UWF3 145 aa25.24■■□□□ 1.63
SSU72-201ENST00000291386 GALNT16Q8N428 558 aa25.24■■□□□ 1.63
SSU72-201ENST00000291386 PAIP2Q9BPZ3 127 aaKnown RBP25.24■■□□□ 1.63
SSU72-201ENST00000291386 ZNF160Q9HCG1 818 aa25.24■■□□□ 1.63
SSU72-201ENST00000291386 MCM8Q9UJA3 840 aa25.24■■□□□ 1.63
SSU72-201ENST00000291386 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.24■■□□□ 1.63
SSU72-201ENST00000291386 IGSF10Q6WRI0 2623 aa25.24■■□□□ 1.63
SSU72-201ENST00000291386 ZFYVE26Q68DK2 2539 aa25.24■■□□□ 1.63
SSU72-201ENST00000291386 A0A1W2PR48 441 aa25.23■■□□□ 1.63
SSU72-201ENST00000291386 ARHGAP10A1A4S6 786 aa25.23■■□□□ 1.63
SSU72-201ENST00000291386 SLC28A1O00337 649 aa25.23■■□□□ 1.63
SSU72-201ENST00000291386 GBAP04062 536 aa25.23■■□□□ 1.63
SSU72-201ENST00000291386 ICAM2P13598 275 aa25.23■■□□□ 1.63
SSU72-201ENST00000291386 BGNP21810 368 aa25.23■■□□□ 1.63
SSU72-201ENST00000291386 OR4D2P58180 307 aa25.23■■□□□ 1.63
SSU72-201ENST00000291386 Q0VFX4 171 aa25.23■■□□□ 1.63
SSU72-201ENST00000291386 SLC13A2Q13183 592 aa25.23■■□□□ 1.63
SSU72-201ENST00000291386 SH2D4BQ5SQS7 431 aa25.23■■□□□ 1.63
SSU72-201ENST00000291386 RAB3IL1Q8TBN0 382 aa25.23■■□□□ 1.63
SSU72-201ENST00000291386 TANKQ92844 425 aa25.23■■□□□ 1.63
SSU72-201ENST00000291386 APIPQ96GX9 242 aa25.23■■□□□ 1.63
SSU72-201ENST00000291386 TUBB1Q9H4B7 451 aa25.23■■□□□ 1.63
SSU72-201ENST00000291386 RPF2Q9H7B2 306 aaKnown RBP25.23■■□□□ 1.63
SSU72-201ENST00000291386 ZNF446Q9NWS9 450 aa25.23■■□□□ 1.63
SSU72-201ENST00000291386 ZDHHC2Q9UIJ5 367 aa25.23■■□□□ 1.63
SSU72-201ENST00000291386 FAM208BQ5VWN6 2430 aa25.23■■□□□ 1.63
SSU72-201ENST00000291386 DOCK10Q96BY6 2186 aa25.22■■□□□ 1.63
SSU72-201ENST00000291386 TGFBR3LH3BV60 316 aa25.22■■□□□ 1.63
SSU72-201ENST00000291386 MASP2O00187 686 aa25.22■■□□□ 1.63
SSU72-201ENST00000291386 ITM2AO43736 263 aa25.22■■□□□ 1.63
SSU72-201ENST00000291386 KLHL41O60662 606 aa25.22■■□□□ 1.63
SSU72-201ENST00000291386 GUCY1B2O75343 617 aa25.22■■□□□ 1.63
SSU72-201ENST00000291386 MAPK12P53778 367 aa25.22■■□□□ 1.63
SSU72-201ENST00000291386 IGLV3-21P80748 117 aaPredicted RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms