RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 FARSBQ9NSD9 589 aaKnown RBP8.59□□□□□ -1.03
HMGN1-201ENST00000288344 OXSMQ9NWU1 459 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 ANAPC2Q9UJX6 822 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 PLLPQ9Y342 182 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 CCL27Q9Y4X3 112 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 CSAG2Q9Y5P2 127 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 TMEM200CA6NKL6 621 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 A6NL46 340 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 WASHC1A8K0Z3 465 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 PROM1O43490 865 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 TMPRSS11DO60235 418 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 CTNSO60931 367 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 EEDO75530 441 aaKnown RBP8.58□□□□□ -1.04
HMGN1-201ENST00000288344 SERPIND1P05546 499 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 RNH1P13489 461 aaKnown RBP8.58□□□□□ -1.04
HMGN1-201ENST00000288344 KRT4P19013 534 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 TSPAN8P19075 237 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 CERS1P27544 350 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 SOX18P35713 384 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 ETV4P43268 484 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 PLA2G16P53816 162 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 HSD17B7P56937 341 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 RAB38P57729 211 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 RPS13P62277 151 aaKnown RBP8.58□□□□□ -1.04
HMGN1-201ENST00000288344 ZNF844Q08AG5 666 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 GALNT1Q10472 559 aaPredicted RBP8.58□□□□□ -1.04
HMGN1-201ENST00000288344 KLRB1Q12918 225 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 CPSF6Q16630 551 aaKnown RBP eCLIP8.58□□□□□ -1.04
HMGN1-201ENST00000288344 HIST2H2ACQ16777 129 aaPredicted RBP8.58□□□□□ -1.04
HMGN1-201ENST00000288344 NADK2Q4G0N4 442 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 C10orf62Q5T681 223 aaPredicted RBP8.58□□□□□ -1.04
HMGN1-201ENST00000288344 FRG2Q64ET8 278 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 HIST2H2AA3Q6FI13 130 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 OR4C11Q6IEV9 310 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 RIPOR1Q6ZS17 1223 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 CLEC1AQ8NC01 280 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 APCDD1LQ8NCL9 501 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 M1APQ8TC57 530 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 HAS2Q92819 552 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 UCN3Q969E3 161 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 KCNC2Q96PR1 638 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 FRG2BQ96QU4 278 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 ZNF382Q96SR6 550 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 CSF3RQ99062 836 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 MTERF1Q99551 399 aaKnown RBP8.58□□□□□ -1.04
HMGN1-201ENST00000288344 MAPKAP1Q9BPZ7 522 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 TUBB6Q9BUF5 446 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 SORBS1Q9BX66 1292 aaKnown RBP8.58□□□□□ -1.04
HMGN1-201ENST00000288344 LHPPQ9H008 270 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 ACTR8Q9H981 624 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 MMP25Q9NPA2 562 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 SEMA4BQ9NPR2 832 aaPredicted RBP8.58□□□□□ -1.04
HMGN1-201ENST00000288344 SIRT5Q9NXA8 310 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 GPR83Q9NYM4 423 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 VTI1BQ9UEU0 232 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 ZNF223Q9UK11 482 aaPredicted RBP8.58□□□□□ -1.04
HMGN1-201ENST00000288344 GRID1Q9ULK0 1009 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 ZNF451Q9Y4E5 1061 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 MMACHCQ9Y4U1 282 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 HIVEP3Q5T1R4 2406 aa8.58□□□□□ -1.04
HMGN1-201ENST00000288344 A0A1W2PR48 441 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 NPIPB8E9PQR5 432 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 B4GALT2O60909 372 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 SMIM24O75264 130 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 GLRA3O75311 464 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 CDC123O75794 336 aaPredicted RBP8.57□□□□□ -1.04
HMGN1-201ENST00000288344 SEMA3DO95025 777 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 TUBBP07437 444 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 ITGAMP11215 1152 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 MAOAP21397 527 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 TPP2P29144 1249 aaPredicted RBP8.57□□□□□ -1.04
HMGN1-201ENST00000288344 ARRB2P32121 409 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 CCT5P48643 541 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 PGDP52209 483 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 FOXA1P55317 472 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 HNRNPH2P55795 449 aaKnown RBP8.57□□□□□ -1.04
HMGN1-201ENST00000288344 EEF1A2Q05639 463 aaKnown RBP8.57□□□□□ -1.04
HMGN1-201ENST00000288344 MPP2Q14168 576 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 ABRAXAS2Q15018 415 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 NSDHLQ15738 373 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 UGT3A2Q3SY77 523 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 CCDC153Q494R4 210 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 BEND6Q5SZJ8 279 aaPredicted RBP8.57□□□□□ -1.04
HMGN1-201ENST00000288344 CES4AQ5XG92 561 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 SLC6A19Q695T7 634 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 FAAH2Q6GMR7 532 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 JMJD6Q6NYC1 403 aaPredicted RBP8.57□□□□□ -1.04
HMGN1-201ENST00000288344 TRIM40Q6P9F5 258 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 CHSY3Q70JA7 882 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 MILR1Q7Z6M3 343 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 ZNF227Q86WZ6 799 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 KBTBD2Q8IY47 623 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 METTL4Q8N3J2 472 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 SRFBP1Q8NEF9 429 aaKnown RBP8.57□□□□□ -1.04
HMGN1-201ENST00000288344 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.57□□□□□ -1.04
HMGN1-201ENST00000288344 TRPC4APQ8TEL6 797 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 PTPMT1Q8WUK0 201 aaPredicted RBP8.57□□□□□ -1.04
HMGN1-201ENST00000288344 CHTF18Q8WVB6 975 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 RGMAQ96B86 450 aa8.57□□□□□ -1.04
HMGN1-201ENST00000288344 SCYL1Q96KG9 808 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms