RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 NLGN4YQ8NFZ3 816 aaPredicted RBP16.23■□□□□ 0.19
SKP2-201ENST00000274254 CLHC1Q8NHS4 586 aa16.23■□□□□ 0.19
SKP2-201ENST00000274254 MR1Q95460 341 aa16.23■□□□□ 0.19
SKP2-201ENST00000274254 TBC1D20Q96BZ9 403 aa16.23■□□□□ 0.19
SKP2-201ENST00000274254 OR1F2PQ96R84 312 aa16.23■□□□□ 0.19
SKP2-201ENST00000274254 TGIF2Q9GZN2 237 aa16.23■□□□□ 0.19
SKP2-201ENST00000274254 IFT80Q9P2H3 777 aaPredicted RBP16.23■□□□□ 0.19
SKP2-201ENST00000274254 HEY2Q9UBP5 337 aa16.23■□□□□ 0.19
SKP2-201ENST00000274254 CTSFQ9UBX1 484 aa16.23■□□□□ 0.19
SKP2-201ENST00000274254 ZNF282Q9UDV7 671 aaPredicted RBP16.23■□□□□ 0.19
SKP2-201ENST00000274254 ARL2BPQ9Y2Y0 163 aa16.23■□□□□ 0.19
SKP2-201ENST00000274254 AK5Q9Y6K8 562 aa16.23■□□□□ 0.19
SKP2-201ENST00000274254 SPACA6W5XKT8 324 aa16.23■□□□□ 0.19
SKP2-201ENST00000274254 VSTM2BA6NLU5 285 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 FAM227AF5H4B4 570 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 NDUFAB1O14561 156 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 BMP10O95393 424 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 CCNYL3P0C7X3 344 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 NR2F6P10588 404 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 CPN2P22792 545 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 BUD31P41223 144 aaPredicted RBP16.22■□□□□ 0.19
SKP2-201ENST00000274254 ATP4BP51164 291 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 CBX1P83916 185 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 MC1RQ01726 317 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 HEPACAMQ14CZ8 416 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 FAM199XQ6PEV8 388 aaPredicted RBP16.22■□□□□ 0.19
SKP2-201ENST00000274254 DTX1Q86Y01 620 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 ZC3H7AQ8IWR0 971 aaKnown RBP16.22■□□□□ 0.19
SKP2-201ENST00000274254 RIMKLAQ8IXN7 391 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 MMP21Q8N119 569 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 ANKS4BQ8N8V4 417 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 FAM47BQ8NA70 645 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 FAIM2Q9BWQ8 316 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 PRDM9Q9NQV7 894 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 LANCL2Q9NS86 450 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 G3BP2Q9UN86 482 aaKnown RBP16.22■□□□□ 0.19
SKP2-201ENST00000274254 PCDHA9Q9Y5H5 950 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 COPG1Q9Y678 874 aaKnown RBP16.22■□□□□ 0.19
SKP2-201ENST00000274254 SCN2AQ99250 2005 aa16.22■□□□□ 0.19
SKP2-201ENST00000274254 C1orf226A1L170 272 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 PSMD12O00232 456 aaPredicted RBP16.21■□□□□ 0.19
SKP2-201ENST00000274254 RAD1O60671 282 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 PRMT3O60678 531 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 PRKRAO75569 313 aaKnown RBP16.21■□□□□ 0.19
SKP2-201ENST00000274254 FHP07954 510 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 DRD2P14416 443 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 NCF2P19878 526 aaPredicted RBP16.21■□□□□ 0.19
SKP2-201ENST00000274254 DDCP20711 480 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 PRPS1L1P21108 318 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 JAK1P23458 1154 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 TLX1P31314 330 aaPredicted RBP16.21■□□□□ 0.19
SKP2-201ENST00000274254 HNRNPFP52597 415 aaKnown RBP16.21■□□□□ 0.19
SKP2-201ENST00000274254 C2orf80Q0P641 193 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 NKG7Q16617 165 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 VWA2Q5GFL6 755 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 CPSF7Q8N684 471 aaKnown RBP16.21■□□□□ 0.19
SKP2-201ENST00000274254 TMEM52Q8NDY8 209 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 CDC26Q8NHZ8 85 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 STT3BQ8TCJ2 826 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 UCN3Q969E3 161 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 ZNF764Q96H86 408 aaPredicted RBP16.21■□□□□ 0.19
SKP2-201ENST00000274254 TEX37Q96LM6 180 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 ZNF578Q96N58 590 aaPredicted RBP16.21■□□□□ 0.19
SKP2-201ENST00000274254 YIPF2Q9BWQ6 316 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 RPF2Q9H7B2 306 aaKnown RBP16.21■□□□□ 0.19
SKP2-201ENST00000274254 SAR1AQ9NR31 198 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 EHD3Q9NZN3 535 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 ZIM2Q9NZV7 527 aa16.21■□□□□ 0.19
SKP2-201ENST00000274254 BLACEA4D250 179 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 C9J4A7 227 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 PGRMC2O15173 223 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 CNOT3O75175 753 aaKnown RBP16.2■□□□□ 0.18
SKP2-201ENST00000274254 JRKO75564 520 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 FURINP09958 794 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 ATXN8OSP0DMR3 200 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 GPX3P22352 226 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 STX1BP61266 288 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 UFM1P61960 85 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 OCA2Q04671 838 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 PDE7AQ13946 482 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 SQLEQ14534 574 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 NCF4Q15080 339 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 RPS6KA2Q15349 733 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 TBC1D25Q3MII6 688 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 ZNF595Q8IYB9 648 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 MIER2Q8N344 545 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 KRTCAP2Q8N6L1 136 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 DNAJB14Q8TBM8 379 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 GFM2Q969S9 779 aaKnown RBP16.2■□□□□ 0.18
SKP2-201ENST00000274254 SLC45A3Q96JT2 553 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 RBCK1Q9BYM8 510 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 DPY30Q9C005 99 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 NMUR2Q9GZQ4 415 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 REEP4Q9H6H4 257 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 WDR54Q9H977 334 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 WDR41Q9HAD4 459 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 C14orf105Q9NVL8 296 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 CCDC88CQ9P219 2028 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 CES1P1Q9UKY3 287 aa16.2■□□□□ 0.18
SKP2-201ENST00000274254 CROCCQ5TZA2 2017 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms