RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 C4orf46Q504U0 113 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 AGAP7PQ5VUJ5 663 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 AMZ2Q86W34 360 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 OR51G2Q8NGK0 314 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 MS4A4AQ96JQ5 239 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 MAELQ96JY0 434 aaKnown RBP11.09□□□□□ -0.63
VPS33A-201ENST00000267199 CCDC32Q9BV29 185 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 SLC27A6Q9Y2P4 619 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 LAMB2P55268 1798 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 TBC1D3DA0A087WVF3 549 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 TBC1D3IA0A087WXS9 549 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 TBC1D3EA0A087X179 549 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 TBC1D3KA0A087X1G2 549 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 A0A1W2PQ09 198 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 OR14I1A6ND48 311 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 TBC1D3FA6NER0 549 aaPredicted RBP11.09□□□□□ -0.63
VPS33A-201ENST00000267199 CD8B2A6NJW9 211 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 WASH4PA8MWX3 477 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 TBC1D3LB9A6J9 549 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 REM1O75628 298 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 HIST1H2ABP04908 130 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 TBC1D3HP0C7X1 549 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 ALPPL2P10696 532 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 CD8BP10966 210 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 LCN1P31025 176 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 VIPR1P32241 457 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 KCNC1P48547 511 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 CLDN8P56748 225 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 PRAMEF14Q5SWL7 426 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 PRAMEF13Q5VWM6 474 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 TBC1D3GQ6DHY5 549 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 GTF2IRD2BQ6EKJ0 949 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 TBC1D3CQ6IPX1 549 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 HIST3H2AQ7L7L0 130 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 TSPAN33Q86UF1 283 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 GTF2IRD2Q86UP8 949 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 TBC1D3Q8IZP1 549 aaPredicted RBP11.09□□□□□ -0.63
VPS33A-201ENST00000267199 PJA1Q8NG27 643 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 SGCDQ92629 289 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 HIST1H2ACQ93077 130 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 CAPNS2Q96L46 248 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 HCN3Q9P1Z3 774 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 SLCO3A1Q9UIG8 710 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 A0A1W2PQ45 241 aaPredicted RBP11.09□□□□□ -0.63
VPS33A-201ENST00000267199 A0A1W2PQY0 241 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 ENTPD6O75354 484 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 OR7A10O76100 309 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 IFNA16P05015 189 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 ANXA3P12429 323 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 BPIP17213 487 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 PSMA3P25788 255 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 PIGAP37287 484 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 ZNF630Q2M218 657 aaPredicted RBP11.09□□□□□ -0.63
VPS33A-201ENST00000267199 CLLU1OSQ5K130 101 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 NCEH1Q6PIU2 408 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 OAFQ86UD1 273 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 PARGQ86W56 976 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 GPR151Q8TDV0 419 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 ISL2Q96A47 359 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 CCDC120Q96HB5 630 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 IGSF21Q96ID5 467 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 MAGIXQ9H6Y5 334 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 DCAF13Q9NV06 445 aaKnown RBP11.09□□□□□ -0.63
VPS33A-201ENST00000267199 HSPE1-MOB4S4R3N1 261 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 GMFGO60234 142 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 POP7O75817 140 aaKnown RBP11.09□□□□□ -0.63
VPS33A-201ENST00000267199 APOC3P02656 99 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 ATXN1LP0C7T5 689 aaKnown RBP11.09□□□□□ -0.63
VPS33A-201ENST00000267199 ACRP10323 421 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 PEPDP12955 493 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 IDSP22304 550 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 KELP23276 732 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 NCBP2P52298 156 aaKnown RBP eCLIP11.09□□□□□ -0.63
VPS33A-201ENST00000267199 ZNHIT3Q15649 155 aaPredicted RBP11.09□□□□□ -0.63
VPS33A-201ENST00000267199 MORN1Q5T089 497 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 SLC25A25Q6KCM7 469 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 ANKRD54Q6NXT1 300 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 FAM124AQ86V42 546 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 APCDD1Q8J025 514 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 CEP76Q8TAP6 659 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 NKD1Q969G9 470 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 MUL1Q969V5 352 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 RFT1Q96AA3 541 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 C11orf84Q9BUA3 381 aaPredicted RBP11.09□□□□□ -0.63
VPS33A-201ENST00000267199 RNF121Q9H920 327 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 RANGRFQ9HD47 186 aaPredicted RBP11.09□□□□□ -0.63
VPS33A-201ENST00000267199 WNT6Q9Y6F9 365 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 LOXHD1Q8IVV2 1947 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 CACNB4O00305 520 aaPredicted RBP11.08□□□□□ -0.64
VPS33A-201ENST00000267199 UBFD1O14562 309 aaKnown RBP11.08□□□□□ -0.64
VPS33A-201ENST00000267199 CAPN5O15484 640 aaPredicted RBP11.08□□□□□ -0.64
VPS33A-201ENST00000267199 RAB36O95755 333 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 ECDO95905 644 aaPredicted RBP11.08□□□□□ -0.64
VPS33A-201ENST00000267199 LAMP1P11279 417 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 ATXN7L3Q14CW9 347 aaPredicted RBP11.08□□□□□ -0.64
VPS33A-201ENST00000267199 PSRC1Q6PGN9 363 aaPredicted RBP11.08□□□□□ -0.64
VPS33A-201ENST00000267199 NUDT8Q8WV74 236 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 PCNPQ8WW12 178 aaKnown RBP11.08□□□□□ -0.64
VPS33A-201ENST00000267199 KLK6Q92876 244 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 ZNF514Q96K75 400 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms