RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 NCKAP1Q9Y2A7 1128 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 LSM2Q9Y333 95 aaKnown RBP8.4□□□□□ -1.06
VAPB-201ENST00000265619 PCDHGA2Q9Y5H1 932 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 HRO43593 1189 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 STAU1O95793 577 aaKnown RBP8.4□□□□□ -1.07
VAPB-201ENST00000265619 OLFM2O95897 454 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 SEMG1P04279 462 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 USP17L7P0C7H9 530 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 JUPP14923 745 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 ZNF16P17020 682 aaPredicted RBP8.4□□□□□ -1.07
VAPB-201ENST00000265619 GDI2P50395 445 aaKnown RBP8.4□□□□□ -1.07
VAPB-201ENST00000265619 INSL4Q14641 139 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 MELKQ14680 651 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 ZNF628Q5EBL2 1059 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 TRIQKQ629K1 86 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 CORO6Q6QEF8 472 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 PAQR3Q6TCH7 311 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 TMEM107Q6UX40 140 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 HTR3DQ70Z44 454 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 SLC16A13Q7RTY0 426 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 SERINC5Q86VE9 423 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 ZNF280BQ86YH2 543 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 ZZZ3Q8IYH5 903 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 B3GALNT2Q8NCR0 500 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 DBF4BQ8NFT6 615 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 OR2T4Q8NH00 348 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 AHCYL2Q96HN2 611 aaKnown RBP8.4□□□□□ -1.07
VAPB-201ENST00000265619 HSH2DQ96JZ2 352 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 SIK2Q9H0K1 926 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 MED28Q9H204 178 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 HEBP1Q9NRV9 189 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 ING4Q9UNL4 249 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 PRKAB1Q9Y478 270 aa8.4□□□□□ -1.07
VAPB-201ENST00000265619 TSC2P49815 1807 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 C2orf78A6NCI8 922 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 ORC5O43913 435 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 SELENOFO60613 162 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 ATG12O94817 140 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 LDOC1O95751 146 aaPredicted RBP8.39□□□□□ -1.07
VAPB-201ENST00000265619 APOC3P02656 99 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 ESR1P03372 595 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 HLA-DQB2P05538 268 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 UROSP10746 265 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 FDXRP22570 491 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 FEN1P39748 380 aaKnown RBP8.39□□□□□ -1.07
VAPB-201ENST00000265619 AVPR1BP47901 424 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 ZXDBP98169 803 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 RUNX1T1Q06455 604 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 GPR176Q14439 515 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 RBMS2Q15434 407 aaKnown RBP8.39□□□□□ -1.07
VAPB-201ENST00000265619 ATXN7L2Q5T6C5 722 aaPredicted RBP8.39□□□□□ -1.07
VAPB-201ENST00000265619 RGS7BPQ6MZT1 257 aaPredicted RBP8.39□□□□□ -1.07
VAPB-201ENST00000265619 NLRC3Q7RTR2 1065 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 LSRQ86X29 649 aaPredicted RBP8.39□□□□□ -1.07
VAPB-201ENST00000265619 OR9Q2Q8NGE9 314 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 TPD52L3Q96J77 140 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 COQ10AQ96MF6 247 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 CPPED1Q9BRF8 314 aaPredicted RBP8.39□□□□□ -1.07
VAPB-201ENST00000265619 GABARAPL3Q9BY60 117 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 LINC00597Q9H2U6 94 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 TXNL4BQ9NX01 149 aaKnown RBP8.39□□□□□ -1.07
VAPB-201ENST00000265619 HCN3Q9P1Z3 774 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 COPZ2Q9P299 210 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 RCOR3Q9P2K3 495 aaPredicted RBP8.39□□□□□ -1.07
VAPB-201ENST00000265619 ACSL5Q9ULC5 683 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 MED16Q9Y2X0 877 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 CCDC88CQ9P219 2028 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 C5orf42Q9H799 3197 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 DENND4AQ7Z401 1863 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 PROM1O43490 865 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 GREM1O60565 184 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 EGFP01133 1207 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 FABP3P05413 133 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 IGFBP1P08833 259 aaPredicted RBP8.39□□□□□ -1.07
VAPB-201ENST00000265619 CKBP12277 381 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 RHCEP18577 417 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 F8A1P23610 371 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 AQP1P29972 269 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 BTCP35070 178 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 SRP9P49458 86 aaKnown RBP8.39□□□□□ -1.07
VAPB-201ENST00000265619 RAB8AP61006 207 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 MAXP61244 160 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 SIM1P81133 766 aaPredicted RBP8.39□□□□□ -1.07
VAPB-201ENST00000265619 IL18Q14116 193 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 SGCAQ16586 387 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 MICAQ29983 383 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 TIGD5Q53EQ6 642 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 NHLRC3Q5JS37 347 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 ANKS6Q68DC2 871 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 ZNF57Q68EA5 555 aaPredicted RBP8.39□□□□□ -1.07
VAPB-201ENST00000265619 GLB1LQ6UWU2 654 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 EIF3MQ7L2H7 374 aaKnown RBP8.39□□□□□ -1.07
VAPB-201ENST00000265619 CDH26Q8IXH8 852 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 OR52P1PQ8NH57 321 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 PDXPQ96GD0 296 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 IL4I1Q96RQ9 567 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 KCNJ15Q99712 375 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 TMEM43Q9BTV4 400 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 GPR63Q9BZJ6 419 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 TMEM245Q9H330 911 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms