RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 FAM43BQ6ZT52 329 aaPredicted RBP10.33□□□□□ -0.76
CD44-201ENST00000263398 SLC29A4Q7RTT9 530 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 TMEM174Q8WUU8 243 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 ACOT12Q8WYK0 555 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 HIST1H2AAQ96QV6 131 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 FEVQ99581 238 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 KCNK13Q9HB14 408 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.33□□□□□ -0.76
CD44-201ENST00000263398 OR2AT4A6NND4 320 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 CAPN14A8MX76 684 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 VILLO15195 856 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 VEGFDO43915 354 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 B4GALT2O60909 372 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 STSP08842 583 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 HOXB2P14652 356 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 GADD45AP24522 165 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 STT3AP46977 705 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 MLLT1Q03111 559 aaPredicted RBP10.33□□□□□ -0.76
CD44-201ENST00000263398 IRF5Q13568 498 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 SMU1Q2TAY7 513 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 AMZ1Q400G9 498 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 CES4AQ5XG92 561 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 CGB2Q6NT52 195 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 NRROSQ86YC3 692 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 JAGN1Q8N5M9 183 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 OR2T33Q8NG76 320 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 SHKBP1Q8TBC3 707 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 PHOSPHO1Q8TCT1 267 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 CHMP1AQ9HD42 196 aaPredicted RBP10.33□□□□□ -0.76
CD44-201ENST00000263398 C12orf4Q9NQ89 552 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 GNG8Q9UK08 70 aa10.33□□□□□ -0.76
CD44-201ENST00000263398 KANTRA0A1W2PQU2 76 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 TSPAN4O14817 238 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 RETP07949 1114 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 HTR1AP08908 422 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 CKMT1AP12532 417 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 NR2C1P13056 603 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 MLLT3P42568 568 aaPredicted RBP10.32□□□□□ -0.76
CD44-201ENST00000263398 AP2S1P53680 142 aaPredicted RBP10.32□□□□□ -0.76
CD44-201ENST00000263398 KLHL26Q53HC5 615 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 ZNF789Q5FWF6 425 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 ENPP6Q6UWR7 440 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 C6orf120Q7Z4R8 191 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 PLA2G15Q8NCC3 412 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 THEM6Q8WUY1 208 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 RELTQ969Z4 430 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 ZNF689Q96CS4 500 aaPredicted RBP10.32□□□□□ -0.76
CD44-201ENST00000263398 JSRP1Q96MG2 331 aaPredicted RBP10.32□□□□□ -0.76
CD44-201ENST00000263398 CCDC115Q96NT0 180 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 SCGB3A2Q96PL1 93 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 DPH2Q9BQC3 489 aaPredicted RBP10.32□□□□□ -0.76
CD44-201ENST00000263398 C11orf49Q9H6J7 331 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 TRPV4Q9HBA0 871 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 EBF1Q9UH73 591 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 BLOC1S5-TXNDC5H3BN57 136 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 ARHGEF15O94989 841 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 AHSA1O95433 338 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 PAK4O96013 591 aaPredicted RBP10.32□□□□□ -0.76
CD44-201ENST00000263398 PRH1P02810 166 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 BPIP17213 487 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 MAGEA2P43356 314 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 INHBCP55103 352 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 MAPK14Q16539 360 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 RUNDC3AQ59EK9 446 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 ZNF101Q8IZC7 436 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 ZNF615Q8N8J6 731 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 TSTD1Q8NFU3 115 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 ZNF431Q8TF32 576 aaPredicted RBP10.32□□□□□ -0.76
CD44-201ENST00000263398 GATA6Q92908 595 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 CREB3L1Q96BA8 519 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 SDHAF3Q9NRP4 125 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 EXTL2Q9UBQ6 330 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 PCDHB14Q9Y5E9 798 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 PCDHGB2Q9Y5G2 931 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 C4BP0C0L5 1744 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 SOBPA7XYQ1 873 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 L7N2F9 121 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 M0QZQ0 153 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 OXSR1O95747 527 aaPredicted RBP10.32□□□□□ -0.76
CD44-201ENST00000263398 FHP07954 510 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 POU6F2P78424 691 aaPredicted RBP10.32□□□□□ -0.76
CD44-201ENST00000263398 ZNF33BQ06732 778 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.32□□□□□ -0.76
CD44-201ENST00000263398 ZNF550Q7Z398 422 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 GPR150Q8NGU9 434 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 HUS1BQ8NHY5 278 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.32□□□□□ -0.76
CD44-201ENST00000263398 SMPDL3BQ92485 455 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 SCRN2Q96FV2 425 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 SECISBP2Q96T21 854 aaKnown RBP10.32□□□□□ -0.76
CD44-201ENST00000263398 IRS2Q9Y4H2 1338 aa10.32□□□□□ -0.76
CD44-201ENST00000263398 KLHL33A6NCF5 533 aa10.31□□□□□ -0.76
CD44-201ENST00000263398 C2orf78A6NCI8 922 aa10.31□□□□□ -0.76
CD44-201ENST00000263398 GRXCR2A6NFK2 248 aa10.31□□□□□ -0.76
CD44-201ENST00000263398 LRRN3E7EW58 273 aa10.31□□□□□ -0.76
CD44-201ENST00000263398 K7ERQ8 282 aa10.31□□□□□ -0.76
CD44-201ENST00000263398 SLC19A2O60779 497 aa10.31□□□□□ -0.76
CD44-201ENST00000263398 APOC1P02654 83 aa10.31□□□□□ -0.76
CD44-201ENST00000263398 CSN2P05814 226 aa10.31□□□□□ -0.76
CD44-201ENST00000263398 PFKMP08237 780 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms