RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 CPZQ66K79 652 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 CEP68Q76N32 757 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 VASH1Q7L8A9 365 aaPredicted RBP12.93□□□□□ -0.34
VMP1-201ENST00000262291 SZRD1Q7Z422 152 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 ZC3H7AQ8IWR0 971 aaKnown RBP12.93□□□□□ -0.34
VMP1-201ENST00000262291 DEFB119Q8N690 84 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 ABHD11Q8NFV4 315 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 RLN3Q8WXF3 142 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 TM4SF18Q96CE8 201 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 MUS81Q96NY9 551 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 TEFMQ96QE5 360 aaKnown RBP12.93□□□□□ -0.34
VMP1-201ENST00000262291 TCEAL2Q9H3H9 227 aaPredicted RBP12.93□□□□□ -0.34
VMP1-201ENST00000262291 TOR3AQ9H497 397 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 C6orf106Q9H6K1 298 aaPredicted RBP12.93□□□□□ -0.34
VMP1-201ENST00000262291 MRPS30Q9NP92 439 aaKnown RBP12.93□□□□□ -0.34
VMP1-201ENST00000262291 WASH6PQ9NQA3 447 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 PNPLA3Q9NST1 481 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 SLCO1B1Q9Y6L6 691 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 TDRD6O60522 2096 aaKnown RBP12.93□□□□□ -0.34
VMP1-201ENST00000262291 RNASET2O00584 256 aaKnown RBP12.93□□□□□ -0.34
VMP1-201ENST00000262291 NDUFS4O43181 175 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 ALBP02768 609 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 ALPLP05186 524 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 INHBBP09529 407 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 DRD1P21728 446 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 S100A1P23297 94 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 ELK4P28324 431 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 PIGAP37287 484 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 C21orf58P58505 322 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 ZBED5Q49AG3 693 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 GPR155Q7Z3F1 870 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 SYNPOQ8N3V7 929 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 FAM160A2Q8N612 972 aaPredicted RBP12.93□□□□□ -0.34
VMP1-201ENST00000262291 NFKBIDQ8NI38 313 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 MAGED4Q96JG8 741 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 BHLHE41Q9C0J9 482 aaPredicted RBP12.93□□□□□ -0.34
VMP1-201ENST00000262291 CXorf36Q9H7Y0 433 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 PELI2Q9HAT8 420 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 ZNF639Q9UID6 485 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 DAPK2Q9UIK4 370 aa12.93□□□□□ -0.34
VMP1-201ENST00000262291 BTN3A3O00478 584 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 GPR37L1O60883 481 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 GCM2O75603 506 aaPredicted RBP12.92□□□□□ -0.34
VMP1-201ENST00000262291 PRSS23O95084 383 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 CYP4B1P13584 511 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 DCTP40126 519 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 OR1E2P47887 323 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 MVDP53602 400 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 RAB8AP61006 207 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 CAMK2BQ13554 666 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 ZNF750Q32MQ0 723 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 KIAA1614Q5VZ46 1190 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 FAM3CQ92520 227 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 SDCCAG3Q96C92 435 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 CHST8Q9H2A9 424 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 ZNF624Q9P2J8 865 aaPredicted RBP12.92□□□□□ -0.34
VMP1-201ENST00000262291 AASSQ9UDR5 926 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 CYP8B1Q9UNU6 501 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 CELA2BP08218 269 aaPredicted RBP12.92□□□□□ -0.34
VMP1-201ENST00000262291 THRBP10828 461 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 ALDH3A2P51648 485 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 NKX2-5P52952 324 aaPredicted RBP12.92□□□□□ -0.34
VMP1-201ENST00000262291 PDE7AQ13946 482 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 NEDD8Q15843 81 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 CARTPTQ16568 116 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 TNFAIP8L2Q6P589 184 aaPredicted RBP12.92□□□□□ -0.34
VMP1-201ENST00000262291 ZNF793Q6ZN11 406 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 CAMKMTQ7Z624 323 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 ZNF761Q86XN6 746 aaPredicted RBP12.92□□□□□ -0.34
VMP1-201ENST00000262291 CADM3Q8N126 398 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 RAB42Q8N4Z0 105 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 OR8K5Q8NH50 307 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 LCN9Q8WX39 176 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 ITPKCQ96DU7 683 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 METTL2AQ96IZ6 378 aaKnown RBP12.92□□□□□ -0.34
VMP1-201ENST00000262291 RHBGQ9H310 441 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 AP3M1Q9Y2T2 418 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 ZNF451Q9Y4E5 1061 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 CCDC88CQ9P219 2028 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 MDC1Q14676 2089 aaKnown RBP12.92□□□□□ -0.34
VMP1-201ENST00000262291 SCN2AQ99250 2005 aa12.92□□□□□ -0.34
VMP1-201ENST00000262291 A0A1W2PS29 197 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 GPR89AB7ZAQ6 455 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 PRAMEF10O60809 474 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 NME6O75414 186 aaPredicted RBP12.91□□□□□ -0.34
VMP1-201ENST00000262291 GPR89BP0CG08 455 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 MYF6P23409 242 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 SSR2P43308 183 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 GSSP48637 474 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 PXNP49023 591 aaPredicted RBP12.91□□□□□ -0.34
VMP1-201ENST00000262291 RPS3AP61247 264 aaKnown RBP12.91□□□□□ -0.34
VMP1-201ENST00000262291 NFATC4Q14934 902 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 OLIG3Q7RTU3 272 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 R3HCC1LQ7Z5L2 792 aaKnown RBP12.91□□□□□ -0.34
VMP1-201ENST00000262291 HMGN2P46Q86SG4 172 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 ZCCHC7Q8N3Z6 543 aaKnown RBP12.91□□□□□ -0.34
VMP1-201ENST00000262291 OR10G6Q8NH81 332 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 FAM131CQ96AQ9 280 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 NECTIN4Q96NY8 510 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 ZNF282Q9UDV7 671 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms