RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 MVDP53602 400 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 CSNK2BP67870 215 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 SLBPQ14493 270 aaKnown RBP eCLIP21.59■■□□□ 1.05
MCF2L-201ENST00000261963 KIAA1614Q5VZ46 1190 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 FAHD1Q6P587 224 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 ZNF438Q7Z4V0 828 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 TSEN54Q7Z6J9 526 aaKnown RBP21.59■■□□□ 1.05
MCF2L-201ENST00000261963 OR4A15Q8NGL6 344 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 NXPE3Q969Y0 559 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 TMCO6Q96DC7 493 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 SDHCQ99643 169 aaPredicted RBP21.59■■□□□ 1.05
MCF2L-201ENST00000261963 COPS4Q9BT78 406 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 SGPP1Q9BX95 441 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 C11orf49Q9H6J7 331 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 ATP6V1HQ9UI12 483 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 ZSCAN5BA6NJL1 495 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 H3BQ06 376 aaPredicted RBP21.58■■□□□ 1.05
MCF2L-201ENST00000261963 WBP4O75554 376 aaKnown RBP21.58■■□□□ 1.05
MCF2L-201ENST00000261963 GBAP04062 536 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 ADH5P11766 374 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 PPIBP23284 216 aaKnown RBP21.58■■□□□ 1.05
MCF2L-201ENST00000261963 CTNNB1P35222 781 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 ELP6Q0PNE2 266 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 DUSP7Q16829 419 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 YIF1BQ5BJH7 314 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 ZNF852Q6ZMS4 543 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 VN1R5Q7Z5H4 357 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 CCDC190Q86UF4 302 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 CCDC71Q8IV32 467 aaPredicted RBP21.58■■□□□ 1.05
MCF2L-201ENST00000261963 OR4K1Q8NGD4 311 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 SPPL3Q8TCT6 385 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 UBE2FQ969M7 185 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 ARRDC3Q96B67 414 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 PHOX2BQ99453 314 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 GDF15Q99988 308 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 REEP1Q9H902 201 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 TBC1D24Q9ULP9 559 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 MAPRE3Q9UPY8 281 aa21.58■■□□□ 1.05
MCF2L-201ENST00000261963 SLC9A3R1O14745 358 aaPredicted RBP21.58■■□□□ 1.04
MCF2L-201ENST00000261963 YES1P07947 543 aa21.58■■□□□ 1.04
MCF2L-201ENST00000261963 PCGF2P35227 344 aa21.58■■□□□ 1.04
MCF2L-201ENST00000261963 TSTA3Q13630 321 aaPredicted RBP21.58■■□□□ 1.04
MCF2L-201ENST00000261963 COMMD6Q7Z4G1 85 aa21.58■■□□□ 1.04
MCF2L-201ENST00000261963 TRAPPC5Q8IUR0 188 aa21.58■■□□□ 1.04
MCF2L-201ENST00000261963 LRRC56Q8IYG6 542 aaPredicted RBP21.58■■□□□ 1.04
MCF2L-201ENST00000261963 ELMOD2Q8IZ81 293 aa21.58■■□□□ 1.04
MCF2L-201ENST00000261963 OR8H2Q8N162 312 aa21.58■■□□□ 1.04
MCF2L-201ENST00000261963 RSPRY1Q96DX4 576 aa21.58■■□□□ 1.04
MCF2L-201ENST00000261963 SPNS1Q9H2V7 528 aa21.58■■□□□ 1.04
MCF2L-201ENST00000261963 RNF167Q9H6Y7 350 aa21.58■■□□□ 1.04
MCF2L-201ENST00000261963 CORO2BQ9UQ03 480 aa21.58■■□□□ 1.04
MCF2L-201ENST00000261963 HMX3A6NHT5 357 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 E9PQ18 207 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 DPM1O60762 260 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 KLHL18O94889 574 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 SOX6P35712 828 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 PNLIPRP1P54315 467 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 UGT2B15P54855 530 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 TBCEQ15813 527 aaPredicted RBP21.57■■□□□ 1.04
MCF2L-201ENST00000261963 COX20Q5RI15 118 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 RTL10Q7L3V2 364 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 ZNF547Q8IVP9 402 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 LAS2Q8IYD9 372 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 ANKK1Q8NFD2 765 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 SETD6Q8TBK2 473 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 REPS1Q96D71 796 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 REEP4Q9H6H4 257 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 DMRT3Q9NQL9 472 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 KRT84Q9NSB2 600 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 ERVK13-1Q9NX77 482 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 ZNF282Q9UDV7 671 aaPredicted RBP21.57■■□□□ 1.04
MCF2L-201ENST00000261963 PRRT4C9JH25 899 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 ERVH48-1M5A8F1 160 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 FOXE1O00358 373 aaPredicted RBP21.57■■□□□ 1.04
MCF2L-201ENST00000261963 PLK4O00444 970 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 SUV39H1O43463 412 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 HLA-EP13747 358 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 GRK5P34947 590 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 ST8SIA6P61647 398 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 HBA1P69905 142 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 ZNF763Q0D2J5 394 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 BPHLQ86WA6 291 aaPredicted RBP21.57■■□□□ 1.04
MCF2L-201ENST00000261963 CADM2Q8N3J6 435 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 ATG16L2Q8NAA4 619 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 WFIKKN2Q8TEU8 576 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 DNASE1L2Q92874 299 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 CXorf40BQ96DE9 158 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 RNF170Q96K19 258 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 CEP19Q96LK0 163 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 Q96MT0 163 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 NEDD4LQ96PU5 975 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 BHLHE41Q9C0J9 482 aaPredicted RBP21.57■■□□□ 1.04
MCF2L-201ENST00000261963 STMN3Q9NZ72 180 aa21.57■■□□□ 1.04
MCF2L-201ENST00000261963 PIPSLA2A3N6 862 aa21.56■■□□□ 1.04
MCF2L-201ENST00000261963 SAP18O00422 153 aaKnown RBP21.56■■□□□ 1.04
MCF2L-201ENST00000261963 PCDHGA12O60330 932 aa21.56■■□□□ 1.04
MCF2L-201ENST00000261963 C9P02748 559 aa21.56■■□□□ 1.04
MCF2L-201ENST00000261963 TRAPPC2P0DI81 140 aa21.56■■□□□ 1.04
MCF2L-201ENST00000261963 TRAPPC2BP0DI82 140 aa21.56■■□□□ 1.04
MCF2L-201ENST00000261963 C1GALT1C1LP0DN25 315 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms