RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 NPAP1Q9NZP6 1156 aa4.29□□□□□ -1.72
TRA2B-201ENST00000259043 TMEM181Q9P2C4 612 aa4.29□□□□□ -1.72
TRA2B-201ENST00000259043 ITGA11Q9UKX5 1188 aa4.29□□□□□ -1.72
TRA2B-201ENST00000259043 STX8Q9UNK0 236 aa4.29□□□□□ -1.72
TRA2B-201ENST00000259043 LAMA4Q16363 1823 aa4.29□□□□□ -1.72
TRA2B-201ENST00000259043 NAV2Q8IVL1 2488 aa4.29□□□□□ -1.72
TRA2B-201ENST00000259043 MYH15Q9Y2K3 1946 aa4.29□□□□□ -1.72
TRA2B-201ENST00000259043 IGSF10Q6WRI0 2623 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 DOCK8Q8NF50 2099 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 LRRD1A4D1F6 860 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 SLC33A1O00400 549 aaPredicted RBP4.28□□□□□ -1.72
TRA2B-201ENST00000259043 SLC30A4O14863 429 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 ZNF821O75541 412 aaPredicted RBP4.28□□□□□ -1.72
TRA2B-201ENST00000259043 LUC7L3O95232 432 aaKnown RBP4.28□□□□□ -1.72
TRA2B-201ENST00000259043 TBX6O95947 436 aaPredicted RBP4.28□□□□□ -1.72
TRA2B-201ENST00000259043 H1F0P07305 194 aaKnown RBP4.28□□□□□ -1.72
TRA2B-201ENST00000259043 PLA2G4BP0C869 781 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 SP9P0CG40 484 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 CD52P31358 61 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 ANP32AP39687 249 aaKnown RBP4.28□□□□□ -1.72
TRA2B-201ENST00000259043 TDO2P48775 406 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 HNRNPKP61978 463 aaKnown RBP eCLIP4.28□□□□□ -1.72
TRA2B-201ENST00000259043 PPP2R5CQ13362 524 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 FAM174BQ3ZCQ3 159 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 USH1GQ495M9 461 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 MARCH8Q5T0T0 291 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 SYCP3Q8IZU3 236 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 ZNF843Q8N446 348 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 ARL10Q8N8L6 244 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 L3MBTL4Q8NA19 623 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 NHLRC2Q8NBF2 726 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 SEMA4DQ92854 862 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 OTUB1Q96FW1 271 aaPredicted RBP4.28□□□□□ -1.72
TRA2B-201ENST00000259043 SPATA33Q96N06 139 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 ZNF599Q96NL3 588 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 IWS1Q96ST2 819 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 CWH43Q9H720 699 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 PXMP2Q9NR77 195 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 KCNJ14Q9UNX9 436 aa4.28□□□□□ -1.72
TRA2B-201ENST00000259043 AKAP13Q12802 2813 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 CCDC171Q6TFL3 1326 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 SMG1Q96Q15 3661 aaKnown RBP4.27□□□□□ -1.73
TRA2B-201ENST00000259043 MBLAC1A4D2B0 266 aaPredicted RBP4.27□□□□□ -1.73
TRA2B-201ENST00000259043 NEMP2A6NFY4 417 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 KRTAP16-1A8MUX0 517 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 RNF113AO15541 343 aaKnown RBP4.27□□□□□ -1.73
TRA2B-201ENST00000259043 HMMRO75330 724 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 IGHDP01880 384 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 FRMD6-AS1P0C7T7 363 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 GOLGA8HP0CJ92 632 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 CEACAM1P13688 526 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 STMN1P16949 149 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 HLA-DPA1P20036 260 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 ITGA3P26006 1051 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 PTPN3P26045 913 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 SLC6A6P31641 620 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 HSD17B3P37058 310 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 LHX1P48742 406 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 SNU13P55769 128 aaKnown RBP4.27□□□□□ -1.73
TRA2B-201ENST00000259043 STX1BP61266 288 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 POLR2LP62875 67 aaKnown RBP4.27□□□□□ -1.73
TRA2B-201ENST00000259043 PRKAA1Q13131 559 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 ITGA9Q13797 1035 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 CCDC92Q53HC0 331 aaPredicted RBP4.27□□□□□ -1.73
TRA2B-201ENST00000259043 LRRC73Q5JTD7 316 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 PLPP4Q5VZY2 271 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 ZSCAN25Q6NSZ9 544 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 GBP6Q6ZN66 633 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 COMMD2Q86X83 199 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 GPALPP1Q8IXQ4 340 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 CRYBG2Q8N1P7 616 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 RYBPQ8N488 228 aaPredicted RBP4.27□□□□□ -1.73
TRA2B-201ENST00000259043 COLGALT1Q8NBJ5 622 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 PSMA8Q8TAA3 256 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 MGARPQ8TDB4 240 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 CCDC107Q8WV48 283 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 SYN2Q92777 582 aaPredicted RBP4.27□□□□□ -1.73
TRA2B-201ENST00000259043 CCDC47Q96A33 483 aaKnown RBP4.27□□□□□ -1.73
TRA2B-201ENST00000259043 NECTIN4Q96NY8 510 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 RTP3Q9BQQ7 232 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 MYNNQ9NPC7 610 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 ZNF71Q9NQZ8 489 aaPredicted RBP4.27□□□□□ -1.73
TRA2B-201ENST00000259043 DUSP12Q9UNI6 340 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 PYGO1Q9Y3Y4 419 aa4.27□□□□□ -1.73
TRA2B-201ENST00000259043 ABCB11O95342 1321 aa4.26□□□□□ -1.73
TRA2B-201ENST00000259043 LAMA1P25391 3075 aa4.26□□□□□ -1.73
TRA2B-201ENST00000259043 LOC400499M0QZD8 3231 aa4.26□□□□□ -1.73
TRA2B-201ENST00000259043 HYKKA2RU49 373 aa4.26□□□□□ -1.73
TRA2B-201ENST00000259043 PRR32B1ATL7 298 aa4.26□□□□□ -1.73
TRA2B-201ENST00000259043 DDX39AO00148 427 aaKnown RBP4.26□□□□□ -1.73
TRA2B-201ENST00000259043 AP5Z1O43299 807 aa4.26□□□□□ -1.73
TRA2B-201ENST00000259043 EXTL3O43909 919 aa4.26□□□□□ -1.73
TRA2B-201ENST00000259043 OR10H2O60403 315 aa4.26□□□□□ -1.73
TRA2B-201ENST00000259043 N4BP1O75113 896 aaKnown RBP4.26□□□□□ -1.73
TRA2B-201ENST00000259043 PGLSO95336 258 aa4.26□□□□□ -1.73
TRA2B-201ENST00000259043 CLPTM1O96005 669 aa4.26□□□□□ -1.73
TRA2B-201ENST00000259043 IGHV2-70P01814 119 aa4.26□□□□□ -1.73
TRA2B-201ENST00000259043 RLN1P04808 185 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms