RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 CAPSLQ8WWF8 208 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 PATE1Q8WXA2 126 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 NODALQ96S42 347 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 MBOAT4Q96T53 435 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 REEP4Q9H6H4 257 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 EXO1Q9UQ84 846 aaKnown RBP13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 MUC3AQ02505 3323 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 LRRK1Q38SD2 2015 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 J3KTA2 159 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 M0R129 80 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 C7P10643 843 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 TCEA1P23193 301 aaKnown RBP13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 ACTR1BP42025 376 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 ACTR1AP61163 376 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 FCHO2Q0JRZ9 810 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 CCDC92Q53HC0 331 aaPredicted RBP13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 GPR153Q6NV75 609 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 FAM9CQ8IZT9 166 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 PAPD5Q8NDF8 572 aaKnown RBP13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 VANGL1Q8TAA9 524 aaPredicted RBP13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 MUC13Q9H3R2 512 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 TEX10Q9NXF1 929 aaPredicted RBP13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 ZNF639Q9UID6 485 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 CAB39Q9Y376 341 aaPredicted RBP13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 PCDHB11Q9Y5F2 797 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 PIAS3Q9Y6X2 628 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 SYNDIG1LA6NDD5 238 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 SCN2BO60939 215 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 NDUFS2O75306 463 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 ZNF846Q147U1 533 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 CTF1Q16619 201 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 BCL7AQ4VC05 210 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 ZZZ3Q8IYH5 903 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 RLN3Q8WXF3 142 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 AIF1LQ9BQI0 150 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 KLHL31Q9H511 634 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 HMG20AQ9NP66 347 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 SPHK1Q9NYA1 384 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 KIF26AQ9ULI4 1882 aaPredicted RBP13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 PLPP1O14494 284 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 KMOO15229 486 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 SUV39H1O43463 412 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 PRAMEF10O60809 474 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 EML2O95834 649 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 NTSR1P30989 418 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 ASMTP46597 345 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 RGNQ15493 299 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 ADPRMQ3LIE5 342 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 TMEM52BQ4KMG9 183 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 RTL10Q7L3V2 364 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 PTOV1Q86YD1 416 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 IL17RCQ8NAC3 791 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 OR8K5Q8NH50 307 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 RPLP0P6Q8NHW5 317 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 ZCCHC10Q8TBK6 192 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 XAGE5Q8WWM1 108 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 YTHDF1Q9BYJ9 559 aaKnown RBP13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 GORASP2Q9H8Y8 452 aa13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.96□□□□□ -0.17
TRAFD1-201ENST00000257604 CACNA1IQ9P0X4 2223 aa13.96□□□□□ -0.18
TRAFD1-201ENST00000257604 NDUFS4O43181 175 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 PRSS23O95084 383 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 FABP3P05413 133 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 BMP4P12644 408 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 JUNBP17275 347 aaPredicted RBP13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 IGFBP5P24593 272 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 KCNC4Q03721 635 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 EMX1Q04741 257 aaPredicted RBP13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 C1orf61Q13536 156 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 MLF2Q15773 248 aaPredicted RBP13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 SOWAHCQ53LP3 525 aaPredicted RBP13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 METTL2BQ6P1Q9 378 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 TMEFF1Q8IYR6 380 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 MRPL38Q96DV4 380 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 FAM120CQ9NX05 1096 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 HELZP42694 1942 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 TRBV5-3A0A0A0MS03 114 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 CACNB4O00305 520 aaPredicted RBP13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 SLC1A7O00341 560 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 ERI3O43414 337 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 CCNDBP1O95273 360 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 C5AR1P21730 350 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 GTF2E2P29084 291 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 RRM2P31350 389 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 FEN1P39748 380 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 CDH12P55289 794 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 DPTQ07507 201 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 LRRC32Q14392 662 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 KCNJ8Q15842 424 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 METRNLQ641Q3 311 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 OR5K2Q8NHB8 316 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 C19orf43Q9BQ61 176 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 DPH7Q9BTV6 452 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 HDAC8Q9BY41 377 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 MROQ9BYG7 248 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 PALMDQ9NP74 551 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 CLEC1BQ9P126 229 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 ENPP5Q9UJA9 477 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 GPR34Q9UPC5 381 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 SAMD4AQ9UPU9 718 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms