RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 SLC38A4Q969I6 547 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 TMEM203Q969S6 136 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 WDR34Q96EX3 536 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 IL17FQ96PD4 163 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 TCF25Q9BQ70 676 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 CCM2Q9BSQ5 444 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 SGPP1Q9BX95 441 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 REEP4Q9H6H4 257 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 PLCXD1Q9NUJ7 323 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 TAAR2Q9P1P5 351 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 GPSM3Q9Y4H4 160 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 CLCA1A8K7I4 914 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 KPNA5O15131 536 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 CPNE3O75131 537 aaKnown RBP9.66□□□□□ -0.86
COPB1-201ENST00000249923 ATG13O75143 517 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 CSF2RAP15509 400 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 SPNP16150 400 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 LAG3P18627 525 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 XCR1P46094 333 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 POLR2LP62875 67 aaKnown RBP9.66□□□□□ -0.86
COPB1-201ENST00000249923 SCARB2Q14108 478 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 TBCEQ15813 527 aaPredicted RBP9.66□□□□□ -0.86
COPB1-201ENST00000249923 ZNF77Q15935 545 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 MICAQ29983 383 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 RPS26P11Q5JNZ5 115 aaPredicted RBP9.66□□□□□ -0.86
COPB1-201ENST00000249923 SNAP47Q5SQN1 464 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 LINC00299Q6ZSB3 139 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 SLC46A3Q7Z3Q1 461 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 LGI4Q8N135 537 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 C2orf73Q8N5S3 287 aaPredicted RBP9.66□□□□□ -0.86
COPB1-201ENST00000249923 C16orf78Q8WTQ4 265 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 UCN3Q969E3 161 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 POP5Q969H6 163 aaKnown RBP9.66□□□□□ -0.86
COPB1-201ENST00000249923 MTERF3Q96E29 417 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 OR5M11Q96RB7 305 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 PSD2Q9BQI7 771 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 RPRD1BQ9NQG5 326 aaKnown RBP9.66□□□□□ -0.86
COPB1-201ENST00000249923 PAQR5Q9NXK6 330 aaPredicted RBP9.66□□□□□ -0.86
COPB1-201ENST00000249923 PLAGL1Q9UM63 463 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 MGAT4DA6NG13 374 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 ACRP10323 421 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 TAS2R50P59544 299 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 LEXMQ3ZCV2 418 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.65□□□□□ -0.86
COPB1-201ENST00000249923 AP2M1Q96CW1 435 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 SPATA9Q9BWV2 254 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 EMILIN2Q9BXX0 1053 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 BHLHE41Q9C0J9 482 aaPredicted RBP9.65□□□□□ -0.86
COPB1-201ENST00000249923 SLC6A16Q9GZN6 736 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 CXorf36Q9H7Y0 433 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 ASAH2Q9NR71 780 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 ZNF221Q9UK13 617 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 SNX11Q9Y5W9 270 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 GASTP01350 101 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 ASMTP46597 345 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 SPIBQ01892 262 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 TIGD6Q17RP2 521 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 ZNF805Q5CZA5 627 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 MED27Q6P2C8 311 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 C11orf96Q7Z7L8 435 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 LYSMD2Q8IV50 215 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 OR52N2Q8NGI0 321 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 IPCEF1Q8WWN9 437 aaPredicted RBP9.65□□□□□ -0.86
COPB1-201ENST00000249923 S100ZQ8WXG8 99 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 GTPBP3Q969Y2 492 aaKnown RBP9.65□□□□□ -0.86
COPB1-201ENST00000249923 METTL2AQ96IZ6 378 aaKnown RBP9.65□□□□□ -0.86
COPB1-201ENST00000249923 COQ10AQ96MF6 247 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 NXF2Q9GZY0 626 aaKnown RBP9.65□□□□□ -0.86
COPB1-201ENST00000249923 THSD1Q9NS62 852 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 C5AR2Q9P296 337 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 ZNF282Q9UDV7 671 aaPredicted RBP9.65□□□□□ -0.86
COPB1-201ENST00000249923 FTSJ1Q9UET6 329 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 IL36AQ9UHA7 158 aa9.65□□□□□ -0.86
COPB1-201ENST00000249923 OTOL1A6NHN0 477 aaPredicted RBP9.65□□□□□ -0.87
COPB1-201ENST00000249923 MEN1O00255 615 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 KCNK2O95069 426 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 SNX4O95219 450 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 APOL3O95236 402 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 KLK1P06870 262 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 FHP07954 510 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 IL3P08700 152 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 CBLP22681 906 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 OR2B6P58173 313 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 SEC23BQ15437 767 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 TPRG1LQ5T0D9 272 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 STEAP3Q658P3 488 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.65□□□□□ -0.87
COPB1-201ENST00000249923 VASH1Q7L8A9 365 aaPredicted RBP9.65□□□□□ -0.87
COPB1-201ENST00000249923 ATCAYQ86WG3 371 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 CFAP206Q8IYR0 622 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 TAGAPQ8N103 731 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 B3GNT7Q8NFL0 401 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 OR4D11Q8NGI4 311 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 ZNF675Q8TD23 568 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 PCNPQ8WW12 178 aaKnown RBP9.65□□□□□ -0.87
COPB1-201ENST00000249923 NXPE3Q969Y0 559 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 TMEM246Q9BRR3 403 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 IRF2BPLQ9H1B7 796 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 TMEM38AQ9H6F2 299 aa9.65□□□□□ -0.87
COPB1-201ENST00000249923 CCNB1IP1Q9NPC3 277 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms