RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 PCDHGB7Q9Y5F8 929 aa12.86□□□□□ -0.35
VEGFA-201ENST00000230480 TMEM200CA6NKL6 621 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 VGLL3A8MV65 326 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 PCDH17O14917 1159 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 POLR3GO15318 223 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-201ENST00000230480 PROM1O43490 865 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 B3GALT2O43825 422 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 PRMT3O60678 531 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 GBAP04062 536 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 CPA3P15088 417 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 PTX3P26022 381 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-201ENST00000230480 CASRP41180 1078 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 ARFIP1P53367 373 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 SLC26A5P58743 744 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 RAE1P78406 368 aaKnown RBP12.85□□□□□ -0.35
VEGFA-201ENST00000230480 KLRB1Q12918 225 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 SLAMF1Q13291 335 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 PRR30Q53SZ7 412 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-201ENST00000230480 SGO1Q5FBB7 561 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 SLC6A19Q695T7 634 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 NIPAL1Q6NVV3 410 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 JMJD6Q6NYC1 403 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-201ENST00000230480 PAPD4Q6PIY7 484 aaKnown RBP12.85□□□□□ -0.35
VEGFA-201ENST00000230480 RIPOR1Q6ZS17 1223 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 Q6ZS92 163 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 CHSY3Q70JA7 882 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 CUZD1Q86UP6 607 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 SRRM1Q8IYB3 904 aaKnown RBP12.85□□□□□ -0.35
VEGFA-201ENST00000230480 MMP21Q8N119 569 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 METTL4Q8N3J2 472 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 CDYL2Q8N8U2 506 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 APCDD1LQ8NCL9 501 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 TCP10LQ8TDR4 215 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 RGMAQ96B86 450 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 APOPT1Q96IL0 206 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 TUBB6Q9BUF5 446 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 MFRPQ9BY79 579 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 MRPL1Q9BYD6 325 aaKnown RBP12.85□□□□□ -0.35
VEGFA-201ENST00000230480 LUZP4Q9P127 313 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 NTNG1Q9Y2I2 539 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 MMACHCQ9Y4U1 282 aa12.85□□□□□ -0.35
VEGFA-201ENST00000230480 A8MUA0 341 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 J3QKU1 62 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 COPEO14579 308 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 PGRMC2O15173 223 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 FGF17O60258 216 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 PRKNO60260 465 aaPredicted RBP12.84□□□□□ -0.35
VEGFA-201ENST00000230480 CTNSO60931 367 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 LDB3O75112 727 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 SASH3O75995 380 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 WISP2O76076 250 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 OTCP00480 354 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 TAC1P20366 129 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 SERPINB3P29508 390 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 ALDH3A1P30838 453 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 CCT5P48643 541 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 HSD17B7P56937 341 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 OR4D2P58180 307 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 ID2Q02363 134 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 ESPL1Q14674 2120 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 PRSS53Q2L4Q9 553 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 CCDC153Q494R4 210 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 MFSD4BQ5TF39 518 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 FCRLBQ6BAA4 426 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 SCIMPQ6UWF3 145 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 FRMD7Q6ZUT3 714 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 GPRIN3Q6ZVF9 776 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 HDXQ7Z353 690 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 CLNKQ7Z7G1 428 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 ZNF227Q86WZ6 799 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 SLC22A9Q8IVM8 553 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 OR4N5Q8IXE1 308 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 KBTBD2Q8IY47 623 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 ARMC10Q8N2F6 343 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 SIRT6Q8N6T7 355 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 ZNF321PQ8N8H1 164 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 ARMC2Q8NEN0 867 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 PTPMT1Q8WUK0 201 aaPredicted RBP12.84□□□□□ -0.35
VEGFA-201ENST00000230480 CHTF18Q8WVB6 975 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 ATP6V1E2Q96A05 226 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 FAR2Q96K12 515 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 MECRQ9BV79 373 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 ACPTQ9BZG2 426 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 FAM107BQ9H098 131 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 MMP25Q9NPA2 562 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 PRTFDC1Q9NRG1 225 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 RIC8BQ9NVN3 520 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 TEX10Q9NXF1 929 aaPredicted RBP12.84□□□□□ -0.35
VEGFA-201ENST00000230480 PLA2G3Q9NZ20 509 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 ANAPC2Q9UJX6 822 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 FBXW2Q9UKT8 454 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 RRP15Q9Y3B9 282 aaKnown RBP12.84□□□□□ -0.35
VEGFA-201ENST00000230480 ZNF451Q9Y4E5 1061 aa12.84□□□□□ -0.35
VEGFA-201ENST00000230480 SERTM1A2A2V5 107 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 HRKO00198 91 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 ZNF354AO60765 605 aaPredicted RBP12.83□□□□□ -0.36
VEGFA-201ENST00000230480 SEMA3DO95025 777 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 ESRRBO95718 433 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 MYL2P10916 166 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 TSFMP43897 325 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms