RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.64■□□□□ 0.73
SNX3-201ENST00000230085 PDZK1P1A8MUH7 402 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 GPR39O43194 453 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 SEC14L5O43304 696 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 SMAD6O43541 496 aaKnown RBP19.64■□□□□ 0.73
SNX3-201ENST00000230085 SLITRK5O94991 958 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 KRT75O95678 551 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 SRCP12931 536 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 JUPP14923 745 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 ITGA2P17301 1181 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 CHMP24386 653 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 NTSR1P30989 418 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 NSG1P42857 185 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 MAPK8P45983 427 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 RPIAP49247 311 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 OR2B6P58173 313 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 ST8SIA6P61647 398 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 COPZ1P61923 177 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 SELENOWP63302 87 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 ENPP2Q13822 863 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 ERAP2Q6P179 960 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 FBXL6Q8N531 539 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 TMEM105Q8N8V8 129 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 CENPOQ9BU64 300 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 OR51E2Q9H255 320 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 MTG2Q9H4K7 406 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 TPT1P8Q9HAU6 139 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 ZFYVE1Q9HBF4 777 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 DYRK4Q9NR20 520 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 NDUFAF4Q9P032 175 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 RUVBL1Q9Y265 456 aaKnown RBP19.64■□□□□ 0.73
SNX3-201ENST00000230085 PCDHB9Q9Y5E1 797 aa19.64■□□□□ 0.73
SNX3-201ENST00000230085 MUC22E2RYF6 1773 aaPredicted RBP19.63■□□□□ 0.73
SNX3-201ENST00000230085 USP34Q70CQ2 3546 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 IGLV3-16A0A075B6K0 115 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 SOCS5O75159 536 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 DIRAS1O95057 198 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 PTHP01270 115 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 TRBC1P01850 177 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 NNMTP40261 264 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 LIMS1P48059 325 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 RBBP4Q09028 425 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 ARHGEF7Q14155 803 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 ATAD3CQ5T2N8 411 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 LIPJQ5W064 366 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 FAM151BQ6UXP7 276 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 KLHDC8AQ8IYD2 350 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 SYTL1Q8IYJ3 562 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 NLGN4XQ8N0W4 816 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 CYP4Z2PQ8N1L4 340 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 CLIP4Q8N3C7 705 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 CXorf40BQ96DE9 158 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 CCDC97Q96F63 343 aaPredicted RBP19.63■□□□□ 0.73
SNX3-201ENST00000230085 FEVQ99581 238 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 MAPKAP1Q9BPZ7 522 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 SPATA6Q9NWH7 488 aaPredicted RBP19.63■□□□□ 0.73
SNX3-201ENST00000230085 TBC1D24Q9ULP9 559 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 CACNA1IQ9P0X4 2223 aa19.63■□□□□ 0.73
SNX3-201ENST00000230085 CHURC1-FNTBB4DL54 471 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 TNFRSF11BO00300 401 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 CCRL2O00421 344 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 NPC1O15118 1278 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 AOAHP28039 575 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 RRM2P31350 389 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 ASMTP46597 345 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 AP1S2P56377 157 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 RHAGQ02094 409 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 ST3GAL4Q11206 333 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 CDK10Q15131 360 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 MICAQ29983 383 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 ANXA8L1Q5VT79 327 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 TRMT11Q7Z4G4 463 aaKnown RBP19.62■□□□□ 0.73
SNX3-201ENST00000230085 STX19Q8N4C7 294 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 C11orf65Q8NCR3 313 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 OR10G2Q8NGC3 310 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 GOT1L1Q8NHS2 421 aaPredicted RBP19.62■□□□□ 0.73
SNX3-201ENST00000230085 FCF1Q9Y324 198 aaKnown RBP19.62■□□□□ 0.73
SNX3-201ENST00000230085 GLYATL1P3A0A0U1RQE8 302 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 B3GALT4O96024 378 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 VIPP01282 170 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 EPHX1P07099 455 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 CA5AP35218 305 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 SPAM1P38567 509 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 CHRNEQ04844 493 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 LRRC66Q68CR7 880 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 SDE2Q6IQ49 451 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 TMEM92Q6UXU6 159 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.62■□□□□ 0.73
SNX3-201ENST00000230085 NANOGNBQ7Z5D8 188 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 ASCC1Q8N9N2 400 aaKnown RBP19.62■□□□□ 0.73
SNX3-201ENST00000230085 COQ8BQ96D53 544 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 ST6GAL2Q96JF0 529 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 EGLN2Q96KS0 407 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 APOLD1Q96LR9 279 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 KCNC2Q96PR1 638 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 GABRG3Q99928 467 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 MYOCQ99972 504 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 TRAF4Q9BUZ4 470 aaPredicted RBP19.62■□□□□ 0.73
SNX3-201ENST00000230085 FZD3Q9NPG1 666 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 ARL15Q9NXU5 204 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms