RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 DEPDC1Q5TB30 811 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 LIPJQ5W064 366 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 OR4C11Q6IEV9 310 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.27□□□□□ -0.29
GPN3-201ENST00000228827 TMEM178AQ8NBL3 297 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 DCAKDQ8WVC6 231 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 VMP1Q96GC9 406 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 CCDC77Q9BR77 488 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 LIN28AQ9H9Z2 209 aaKnown RBP13.27□□□□□ -0.29
GPN3-201ENST00000228827 LYRM4Q9HD34 91 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 ADAP2Q9NPF8 381 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 XPR1Q9UBH6 696 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 SH3BGRL2Q9UJC5 107 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 RNF11Q9Y3C5 154 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 PCDHGB6Q9Y5F9 930 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 TNPO3Q9Y5L0 923 aaKnown RBP13.27□□□□□ -0.29
GPN3-201ENST00000228827 DOPEY2Q9Y3R5 2298 aa13.26□□□□□ -0.29
GPN3-201ENST00000228827 TRGV8A0A0C4DH27 118 aa13.26□□□□□ -0.29
GPN3-201ENST00000228827 PRKNO60260 465 aaPredicted RBP13.26□□□□□ -0.29
GPN3-201ENST00000228827 TNNI3P19429 210 aa13.26□□□□□ -0.29
GPN3-201ENST00000228827 PIK3CBP42338 1070 aa13.26□□□□□ -0.29
GPN3-201ENST00000228827 HLCSP50747 726 aa13.26□□□□□ -0.29
GPN3-201ENST00000228827 ALDH6A1Q02252 535 aaKnown RBP13.26□□□□□ -0.29
GPN3-201ENST00000228827 TERF2Q15554 542 aa13.26□□□□□ -0.29
GPN3-201ENST00000228827 ELAVL1Q15717 326 aaKnown RBP13.26□□□□□ -0.29
GPN3-201ENST00000228827 C16orf47Q6ZP98 133 aaPredicted RBP13.26□□□□□ -0.29
GPN3-201ENST00000228827 MAMDC2Q7Z304 686 aaPredicted RBP13.26□□□□□ -0.29
GPN3-201ENST00000228827 OR4N5Q8IXE1 308 aa13.26□□□□□ -0.29
GPN3-201ENST00000228827 CEP112Q8N8E3 955 aa13.26□□□□□ -0.29
GPN3-201ENST00000228827 ATP6V1E2Q96A05 226 aa13.26□□□□□ -0.29
GPN3-201ENST00000228827 ISL2Q96A47 359 aa13.26□□□□□ -0.29
GPN3-201ENST00000228827 RGMAQ96B86 450 aa13.26□□□□□ -0.29
GPN3-201ENST00000228827 CDK15Q96Q40 435 aa13.26□□□□□ -0.29
GPN3-201ENST00000228827 CENPKQ9BS16 269 aa13.26□□□□□ -0.29
GPN3-201ENST00000228827 NOL11Q9H8H0 719 aaKnown RBP13.26□□□□□ -0.29
GPN3-201ENST00000228827 ADGRE2Q9UHX3 823 aa13.26□□□□□ -0.29
GPN3-201ENST00000228827 PCDHGA11Q9Y5H2 935 aa13.26□□□□□ -0.29
GPN3-201ENST00000228827 CLCA3PQ9Y6N3 262 aa13.26□□□□□ -0.29
GPN3-201ENST00000228827 SPACA6W5XKT8 324 aa13.26□□□□□ -0.29
GPN3-201ENST00000228827 CPAMD8Q8IZJ3 1885 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 EXOC1LA0A1B0GW35 172 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 PLPP1O14494 284 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 OR7A17O14581 309 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 PRKRAO75569 313 aaKnown RBP13.25□□□□□ -0.29
GPN3-201ENST00000228827 ITGA10O75578 1167 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 SCELO95171 688 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 RBP1P09455 135 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 RHOXF2BP0C7M4 288 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 TRHRP34981 398 aaPredicted RBP13.25□□□□□ -0.29
GPN3-201ENST00000228827 GPR143P51810 404 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 NEK2P51955 445 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 PER3P56645 1201 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 PHEXP78562 749 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 SLAMF1Q13291 335 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 ZRSR2Q15696 482 aaKnown RBP13.25□□□□□ -0.29
GPN3-201ENST00000228827 RPS27LQ71UM5 84 aaKnown RBP13.25□□□□□ -0.29
GPN3-201ENST00000228827 ZNF227Q86WZ6 799 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 TMEM132CQ8N3T6 1108 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 TMEM156Q8N614 296 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 ZNF321PQ8N8H1 164 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 FAM98AQ8NCA5 519 aaKnown RBP13.25□□□□□ -0.29
GPN3-201ENST00000228827 PTPMT1Q8WUK0 201 aaPredicted RBP13.25□□□□□ -0.29
GPN3-201ENST00000228827 TMEM125Q96AQ2 219 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 REPS1Q96D71 796 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 MTFMTQ96DP5 389 aaKnown RBP13.25□□□□□ -0.29
GPN3-201ENST00000228827 NSUN5Q96P11 429 aaKnown RBP13.25□□□□□ -0.29
GPN3-201ENST00000228827 RHOXF2Q9BQY4 288 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 OR8D2Q9GZM6 311 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 ZNF180Q9UJW8 692 aa13.25□□□□□ -0.29
GPN3-201ENST00000228827 A0A1B0GUH1 482 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 ASPDHA6ND91 283 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 C17orf105B2RV13 164 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 NPIPA5E9PKD4 350 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 H0YIV9 168 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 FGF17O60258 216 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 NME2P1O60361 137 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 ZG16O60844 167 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 SMIM24O75264 130 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 ZFAND5O76080 213 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 NME2P22392 152 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 CNTFP26441 200 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 RBPJQ06330 500 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 SERTAD2Q14140 314 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 TSNAXIP1Q2TAA8 658 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 C18orf63Q68DL7 685 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 IFT20Q8IY31 132 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 CPSF7Q8N684 471 aaKnown RBP13.24□□□□□ -0.29
GPN3-201ENST00000228827 L3MBTL4Q8NA19 623 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 OR52B6Q8NGF0 335 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 OR14A16Q8NHC5 309 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 DAZLQ92904 295 aaKnown RBP13.24□□□□□ -0.29
GPN3-201ENST00000228827 ANKRD9Q96BM1 317 aaPredicted RBP13.24□□□□□ -0.29
GPN3-201ENST00000228827 TRIM44Q96DX7 344 aaPredicted RBP13.24□□□□□ -0.29
GPN3-201ENST00000228827 FRMD6Q96NE9 622 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 TRIM45Q9H8W5 580 aaPredicted RBP13.24□□□□□ -0.29
GPN3-201ENST00000228827 VTI1BQ9UEU0 232 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 NPIPA1Q9UND3 350 aa13.24□□□□□ -0.29
GPN3-201ENST00000228827 PPIEQ9UNP9 301 aaKnown RBP13.24□□□□□ -0.29
GPN3-201ENST00000228827 USP9YO00507 2555 aaPredicted RBP13.24□□□□□ -0.29
GPN3-201ENST00000228827 ESPL1Q14674 2120 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms