RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 MOSPD1Q9UJG1 213 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 PCDHGA6Q9Y5G7 932 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 EDDM13A0A1B0GTR0 161 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 SSX4O60224 188 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 KCNK2O95069 426 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 FURINP09958 794 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 HSD3B1P14060 373 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 HSD3B2P26439 372 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 EIF2DP41214 584 aaKnown RBP12.54□□□□□ -0.4
CTNS-201ENST00000046640 MVDP53602 400 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 ELP6Q0PNE2 266 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 PRAMEF14Q5SWL7 426 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 PRAMEF13Q5VWM6 474 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 GPR155Q7Z3F1 870 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 SZRD1Q7Z422 152 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 ADCK2Q7Z695 626 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 TSEN54Q7Z6J9 526 aaKnown RBP12.54□□□□□ -0.4
CTNS-201ENST00000046640 CACTIN-AS1Q8N1I8 211 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 CENPOQ9BU64 300 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 SLC6A16Q9GZN6 736 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 XKR8Q9H6D3 395 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 C14orf119Q9NWQ9 140 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 NFKBIL1Q9UBC1 381 aaPredicted RBP12.54□□□□□ -0.4
CTNS-201ENST00000046640 BTNL2Q9UIR0 455 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 OSGIN1Q9UJX0 560 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 RAB23Q9ULC3 237 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 PPM1DO15297 605 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 HOXC11O43248 304 aaPredicted RBP12.53□□□□□ -0.4
CTNS-201ENST00000046640 UPK1BO75841 260 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 DNAJB5O75953 348 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 TCEA1P23193 301 aaKnown RBP12.53□□□□□ -0.4
CTNS-201ENST00000046640 SCARB2Q14108 478 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 TPRG1LQ5T0D9 272 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 DESI1Q6ICB0 168 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 TANGO2Q6ICL3 276 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 VN1R5Q7Z5H4 357 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 HMGN2P46Q86SG4 172 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 AMZ2Q86W34 360 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 C7orf61Q8IZ16 206 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 SLC38A4Q969I6 547 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 REPS1Q96D71 796 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 DOHHQ9BU89 302 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 EFCAB11Q9BUY7 163 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 SGPP1Q9BX95 441 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 CHST8Q9H2A9 424 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 EHD1Q9H4M9 534 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 SLC27A6Q9Y2P4 619 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 SNX11Q9Y5W9 270 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 TRPM6Q9BX84 2022 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 F5P12259 2224 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 A0A1W2PRB8 838 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 PRAMEF25A6NGN4 478 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 SH3BP5O60239 455 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 PAK4O96013 591 aaPredicted RBP12.53□□□□□ -0.4
CTNS-201ENST00000046640 SEMG1P04279 462 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 IL1RNP18510 177 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 POU1F1P28069 291 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 ACADLP28330 430 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 SPIBQ01892 262 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 BCL7AQ4VC05 210 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 RPS26P11Q5JNZ5 115 aaPredicted RBP12.53□□□□□ -0.4
CTNS-201ENST00000046640 TNFAIP8L2Q6P589 184 aaPredicted RBP12.53□□□□□ -0.4
CTNS-201ENST00000046640 AKAP14Q86UN6 197 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 LRRC56Q8IYG6 542 aaPredicted RBP12.53□□□□□ -0.4
CTNS-201ENST00000046640 STX19Q8N4C7 294 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 SLC5A8Q8N695 610 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 OR2L2Q8NH16 312 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 WFIKKN2Q8TEU8 576 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 STARD8Q92502 1023 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 GTPBP3Q969Y2 492 aaKnown RBP12.53□□□□□ -0.4
CTNS-201ENST00000046640 CHFRQ96EP1 664 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 OTUB1Q96FW1 271 aaPredicted RBP12.53□□□□□ -0.4
CTNS-201ENST00000046640 ASB16Q96NS5 453 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 PSD2Q9BQI7 771 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 NDUFAF4Q9P032 175 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 ZNF282Q9UDV7 671 aaPredicted RBP12.53□□□□□ -0.4
CTNS-201ENST00000046640 SERGEFQ9UGK8 458 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 VCANP13611 3396 aa12.53□□□□□ -0.4
CTNS-201ENST00000046640 TNFRSF11BO00300 401 aa12.52□□□□□ -0.4
CTNS-201ENST00000046640 RNASET2O00584 256 aaKnown RBP12.52□□□□□ -0.4
CTNS-201ENST00000046640 EN2P19622 333 aaPredicted RBP12.52□□□□□ -0.4
CTNS-201ENST00000046640 CTSKP43235 329 aa12.52□□□□□ -0.4
CTNS-201ENST00000046640 LRRC74AQ0VAA2 488 aa12.52□□□□□ -0.4
CTNS-201ENST00000046640 VEZF1Q14119 521 aa12.52□□□□□ -0.4
CTNS-201ENST00000046640 PROX2Q3B8N5 592 aa12.52□□□□□ -0.4
CTNS-201ENST00000046640 IQCCQ4KMZ1 466 aa12.52□□□□□ -0.4
CTNS-201ENST00000046640 FAM124AQ86V42 546 aa12.52□□□□□ -0.4
CTNS-201ENST00000046640 LSRQ86X29 649 aaPredicted RBP12.52□□□□□ -0.4
CTNS-201ENST00000046640 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.52□□□□□ -0.4
CTNS-201ENST00000046640 CELF2-AS1Q8N7Q2 184 aa12.52□□□□□ -0.4
CTNS-201ENST00000046640 OR9Q2Q8NGE9 314 aa12.52□□□□□ -0.4
CTNS-201ENST00000046640 SP7Q8TDD2 431 aaPredicted RBP12.52□□□□□ -0.4
CTNS-201ENST00000046640 GGHQ92820 318 aa12.52□□□□□ -0.4
CTNS-201ENST00000046640 FAM83CQ9BQN1 747 aa12.52□□□□□ -0.4
CTNS-201ENST00000046640 PRSS16Q9NQE7 514 aa12.52□□□□□ -0.4
CTNS-201ENST00000046640 MBNL1Q9NR56 388 aaKnown RBP12.52□□□□□ -0.4
CTNS-201ENST00000046640 KNL1Q8NG31 2342 aa12.52□□□□□ -0.4
CTNS-201ENST00000046640 PRAMEF33A0A0G2JMD5 474 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 A8MV72 311 aaPredicted RBP12.52□□□□□ -0.41
CTNS-201ENST00000046640 MID1O15344 667 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms