RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 TRIM55Q9BYV6 548 aa11.33□□□□□ -0.6
SYPL1-201ENST00000011473 NECTIN3Q9NQS3 549 aa11.33□□□□□ -0.6
SYPL1-201ENST00000011473 SEMA3GQ9NS98 782 aa11.33□□□□□ -0.6
SYPL1-201ENST00000011473 PNPOQ9NVS9 261 aa11.33□□□□□ -0.6
SYPL1-201ENST00000011473 POLHQ9Y253 713 aa11.33□□□□□ -0.6
SYPL1-201ENST00000011473 POLR3HQ9Y535 204 aaPredicted RBP11.33□□□□□ -0.6
SYPL1-201ENST00000011473 ASB4Q9Y574 426 aa11.33□□□□□ -0.6
SYPL1-201ENST00000011473 A0A1W2PR48 441 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 PRMT3O60678 531 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 CHEK2O96017 543 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 KITP10721 976 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 JAK1P23458 1154 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 PPP2R1BP30154 601 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 TSFMP43897 325 aaKnown RBP11.32□□□□□ -0.6
SYPL1-201ENST00000011473 RAE1P78406 368 aaKnown RBP11.32□□□□□ -0.6
SYPL1-201ENST00000011473 SLC13A2Q13183 592 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 MRM1Q6IN84 353 aaKnown RBP11.32□□□□□ -0.6
SYPL1-201ENST00000011473 RAB43Q86YS6 212 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 OR4N5Q8IXE1 308 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 OR11G2Q8NGC1 345 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 ZNF75CPQ92670 426 aaPredicted RBP11.32□□□□□ -0.6
SYPL1-201ENST00000011473 FAM117AQ9C073 453 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 ILKAPQ9H0C8 392 aaPredicted RBP11.32□□□□□ -0.6
SYPL1-201ENST00000011473 LYRM4Q9HD34 91 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 INTS9Q9NV88 658 aaKnown RBP11.32□□□□□ -0.6
SYPL1-201ENST00000011473 AHSPQ9NZD4 102 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 C5AR2Q9P296 337 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 FBXL4Q9UKA2 621 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 RAP2CQ9Y3L5 183 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 PROM1O43490 865 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 MAPK12P53778 367 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 ACSM2AQ08AH3 577 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 RAPSNQ13702 412 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 NR6A1Q15406 480 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 GALNTL6Q49A17 601 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 CRTC2Q53ET0 693 aaPredicted RBP11.32□□□□□ -0.6
SYPL1-201ENST00000011473 HSP90B2PQ58FF3 399 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 ACSM2BQ68CK6 577 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 FAM180BQ6P0A1 224 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 METTL21AQ8WXB1 218 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 SLCO1B3Q9NPD5 702 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 PRTFDC1Q9NRG1 225 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 NMRK1Q9NWW6 199 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 CLDN16Q9Y5I7 305 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 KCNMB2Q9Y691 235 aa11.32□□□□□ -0.6
SYPL1-201ENST00000011473 CCDC88CQ9P219 2028 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 GNG14A0A1W2PPG7 69 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 A0A1W2PS29 197 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 PEX12O00623 359 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 PCDH7O60245 1069 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 SNNO75324 88 aaPredicted RBP11.31□□□□□ -0.6
SYPL1-201ENST00000011473 SEC22BO75396 215 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 SEC24DO94855 1032 aaPredicted RBP11.31□□□□□ -0.6
SYPL1-201ENST00000011473 AIFM1O95831 613 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 ACPPP15309 386 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 IL10P22301 178 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 RPL14P50914 215 aaKnown RBP11.31□□□□□ -0.6
SYPL1-201ENST00000011473 TNFRSF17Q02223 184 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 TBR1Q16650 682 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 TUBB8Q3ZCM7 444 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 RFTN2Q52LD8 501 aaPredicted RBP11.31□□□□□ -0.6
SYPL1-201ENST00000011473 NDUFAF5Q5TEU4 345 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 PAGE2Q7Z2X7 111 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 CDC26Q8NHZ8 85 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 THAP4Q8WY91 577 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 C11orf24Q96F05 449 aaPredicted RBP11.31□□□□□ -0.6
SYPL1-201ENST00000011473 ING2Q9H160 280 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 RPF2Q9H7B2 306 aaKnown RBP11.31□□□□□ -0.6
SYPL1-201ENST00000011473 CLK4Q9HAZ1 481 aaKnown RBP11.31□□□□□ -0.6
SYPL1-201ENST00000011473 ZNF160Q9HCG1 818 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 THAP1Q9NVV9 213 aa11.31□□□□□ -0.6
SYPL1-201ENST00000011473 SERTM1A2A2V5 107 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 A6NL46 340 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 A8MUA0 341 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 LSM1O15116 133 aaKnown RBP11.3□□□□□ -0.6
SYPL1-201ENST00000011473 PGRMC2O15173 223 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 RGS14O43566 566 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 FGF17O60258 216 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 PEX11AO75192 247 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 RSL1D1O76021 490 aaKnown RBP11.3□□□□□ -0.6
SYPL1-201ENST00000011473 CELA2AP08217 269 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 COX6A1P12074 109 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 ARFIP1P53367 373 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 RPL38P63173 70 aaKnown RBP11.3□□□□□ -0.6
SYPL1-201ENST00000011473 OCRLQ01968 901 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 ZNF33BQ06732 778 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 SPIN4Q56A73 249 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 DCAF10Q5QP82 559 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 ATG16L1Q676U5 607 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 BORAQ6PGQ7 559 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 TMEM205Q6UW68 189 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 QSOX2Q6ZRP7 698 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 ANKRD37Q7Z713 158 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 C19orf60Q96EN9 201 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 NUF2Q9BZD4 464 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 LRTM1Q9HBL6 345 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 PRDM9Q9NQV7 894 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 PHF11Q9UIL8 331 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 DLGAP4Q9Y2H0 992 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 SPACA6W5XKT8 324 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms