RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Pramef20B1ARV6 477 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 FpgtG5E8F4 590 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Vmn2r12L7N217 831 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Psmb10O35955 273 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Zfp60P16374 707 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Id2P41136 134 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Arhgap39P59281 1107 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 SynaQ5G5D5 617 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Olfr1364Q5SZS9 314 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Heatr6Q6P1G0 1184 aaKnown RBP15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Naa50Q6PGB6 169 aaKnown RBP15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Krt75Q8BGZ7 551 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Strip2Q8C9H6 844 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Polr1eQ8K202 482 aaKnown RBP15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 NrmQ8VC65 262 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Slc52a3Q9D6X5 460 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Tex22Q9D9U4 189 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Tmprss6Q9DBI0 811 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 AcoxlQ9DBS4 632 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Pop7Q9DCH2 140 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Khdrbs2Q9WU01 349 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gm14295A2BG91 834 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gm20547B8JJN0 1276 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gm6811E9Q3Y8 510 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Best1O88870 551 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 CfbP04186 761 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Nid1P10493 1245 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gabrg2P22723 474 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Nedd8P29595 81 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Tmem165P52875 323 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Adra1aP97718 466 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 VldlrP98156 873 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 CcinQ8CDE2 588 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Pcolce2Q8R4W6 414 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Utp6Q8VCY6 597 aaKnown RBP15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Olfr811Q8VFI1 319 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Olfr691Q8VGW5 322 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Vmn1r69Q8VIC1 319 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Oosp1Q925U0 202 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Serpinb1aQ9D154 379 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Sars2Q9JJL8 518 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Vps13aQ5H8C4 3166 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Igkv4-86A0A0G2JGE7 114 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Tex13aA2AFS9 377 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 S100zB9EJL3 99 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Gm6614M0QWR8 670 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 MndaP0DOV1 425 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 BrafP28028 804 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Gadd45aP48316 165 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 KapP61110 121 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Tbx4P70325 552 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Cry1P97784 606 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Garem1Q3UFT3 876 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Ccser2Q3UHI0 833 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Slc17a4Q5NCM1 492 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Taar7bQ5QD11 358 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Zp1Q62005 623 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Nsg1Q62092 185 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Q8BHB7 409 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Gpr158Q8C419 1200 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 1700020N01RikQ8CF20 87 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Osgin1Q8VC10 478 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Khdc3Q9CWU5 440 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Scnn1gQ9WU39 655 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Gm13420A0A140LJJ2 248 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Ssc4dA1L0T3 586 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Zfp738B8JJX8 793 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Gm8897L7N294 181 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Sod2P09671 222 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Serpind1P49182 478 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 EsrrgP62509 458 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Gsk3aQ2NL51 490 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Gdpgp1Q3TLS3 386 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Nr1h4Q60641 488 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Olfr320Q7TRZ4 306 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Ifnl3Q8CGK6 193 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 TrhdeQ8K093 1025 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Nfatc4Q8K120 901 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Ebf4Q8K4J2 599 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 GatbQ99JT1 557 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Hspa14Q99M31 509 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 2310003L06RikQ9CV82 495 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Psg23Q9D2U0 471 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Psg21Q9DAV5 471 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Emc7Q9EP72 241 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Panx1Q9JIP4 426 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Plscr1Q9JJ00 328 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 Srd5a3Q9WUP4 330 aa15.14■□□□□ 0.01
Trim39-203ENSMUST00000113706 ThpoP40226 356 aa15.13■□□□□ 0.01
Trim39-203ENSMUST00000113706 AcadlP51174 430 aaKnown RBP15.13■□□□□ 0.01
Trim39-203ENSMUST00000113706 Nudt2P56380 147 aa15.13■□□□□ 0.01
Trim39-203ENSMUST00000113706 ClpbQ60649 677 aa15.13■□□□□ 0.01
Trim39-203ENSMUST00000113706 Tusc1Q673H1 205 aa15.13■□□□□ 0.01
Trim39-203ENSMUST00000113706 Olfr871Q7TRF0 311 aa15.13■□□□□ 0.01
Trim39-203ENSMUST00000113706 Olfr297Q7TS07 310 aa15.13■□□□□ 0.01
Trim39-203ENSMUST00000113706 IlvblQ8BU33 632 aa15.13■□□□□ 0.01
Trim39-203ENSMUST00000113706 Lurap1lQ8K2P1 221 aa15.13■□□□□ 0.01
Trim39-203ENSMUST00000113706 Vps4aQ8VEJ9 437 aa15.13■□□□□ 0.01
Trim39-203ENSMUST00000113706 Sec16bQ91XT4 1051 aa15.13■□□□□ 0.01
Trim39-203ENSMUST00000113706 Lhx9Q9WUH2 397 aa15.13■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms