RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Ica1P97411 478 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Cd80Q00609 306 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Prss53Q571E5 552 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Cr1lQ64735 483 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Tmem130Q6NXM3 419 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Igsf21Q7TNR6 468 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr774Q7TRI5 312 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Arhgap11aQ80Y19 987 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Cdhr3Q8BL00 831 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Dclk3Q8BWQ5 790 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Lrtm1Q8BXQ3 356 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Epha10Q8BYG9 1007 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Wwp1Q8BZZ3 918 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Cep68Q8C0D9 733 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Vps9d1Q8C190 649 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 MetrnQ8C1Q4 291 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Wdr47Q8CGF6 920 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gfm2Q8R2Q4 779 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Ints14Q8R3P6 515 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Clec2fQ8VI21 196 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Tmem246Q91YV9 403 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Grip1Q925T6 1127 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Scamp2Q9ERN0 329 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Klrc2Q9WTJ9 238 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Anapc7Q9WVM3 565 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Cpxm1Q9Z100 722 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 NesQ6P5H2 1864 aaKnown RBP8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Usp42B2RQC2 1324 aaKnown RBP8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Trav7n-5A0A075B604 112 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 AccsA2AIG8 502 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gpr155A2AWR3 868 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Smlr1J3QMJ4 66 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gm3182K7N6T8 263 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Serpinb8O08800 374 aaKnown RBP8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 DffaO54786 331 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Cyp26a1O55127 497 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 ItgamP05555 1153 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Eno3P21550 434 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Zfp36l2P23949 484 aaKnown RBP8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Cdkn1bP46414 197 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Rbx1P62878 108 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Anxa4P97429 319 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 F13bQ07968 669 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Acss3Q14DH7 682 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Arhgap9Q1HDU4 648 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Xrra1Q3U3V8 786 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 H2-Eb2Q3UUV9 287 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Clca4bQ3UW98 925 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 4930438A08RikQ5SPH3 536 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Fstl4Q5STE3 841 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 NotoQ5TIS6 240 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Flot2Q60634 428 aaKnown RBP8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Mtnr1aQ61184 353 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Antxr2Q6DFX2 487 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Fastkd5Q7TMV3 762 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gpatch2Q7TQC7 527 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr1105Q7TR58 312 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gabbr2Q80T41 940 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Fbxw26Q8BI58 466 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Pou6f2Q8BJI4 691 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 H6pdQ8CFX1 789 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Bbs7Q8K2G4 715 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Mri1Q9CQT1 369 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Eral1Q9CZU4 437 aaKnown RBP8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Wwp2Q9DBH0 870 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Tspan4Q9DCK3 238 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Tlr6Q9EPW9 795 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Mrps34Q9JIK9 218 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Tfr2Q9JKX3 798 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Calm4Q9JM83 148 aa8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Ndufa7Q9Z1P6 113 aaKnown RBP8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Rbbp6P97868 1790 aaKnown RBP8.66□□□□□ -1.02
Upf3b-201ENSMUST00000076265 PfasQ5SUR0 1337 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Sirpb1aA0A0A6YYP6 397 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Rpl23a-ps3A0A140T8M7 156 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Kiaa1324A2AFS3 1009 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Fam98cE9PYD1 344 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Lgals6O54891 301 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Surf2P09926 257 aaKnown RBP8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 H2-D1P14427 368 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Ets2P15037 468 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 CebpgP53568 150 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 CtdsplP58465 276 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Rpl23aP62751 156 aaKnown RBP8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 TekQ02858 1122 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Map3k8Q07174 467 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Oog3Q3UWY1 500 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Xaf1Q5NBU8 273 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Fbxw11Q5SRY7 542 aaKnown RBP8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Pla2g7Q60963 440 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Kcnc3Q63959 769 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Zzz3Q6KAQ7 910 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Slc16a9Q7TM99 508 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Arhgap22Q8BL80 702 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 MmaaQ8C7H1 415 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Mboat7Q8CHK3 473 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr1512Q8VF72 313 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Usp26Q99MX1 835 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr27Q9EQ90 311 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Ropn1Q9ESG2 212 aa8.65□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms