RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Trp53i11Q4QQM4 189 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Glp2rQ5IXF8 512 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ranbp10Q6VN19 620 aaKnown RBP6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Lrrc75bQ7TPD7 306 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tmprss7Q8BIK6 829 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Smyd4Q8BTK5 799 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Stk32cQ8QZV4 488 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Olfr700Q8VFM5 316 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Chmp1b1Q99LU0 199 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Bex4Q9CWT2 118 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Hhipl2Q9D2G9 717 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 1700086D15RikQ9D9E9 151 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Osbpl3Q9DBS9 855 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Aif1lQ9EQX4 150 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Hipk3Q9ERH7 1192 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Slc28a3Q9ERH8 703 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Il20Q9JKV9 176 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Dnase2bQ9QY48 354 aa6.6□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Lcn5A2AJB7 192 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Spats1A2RRY8 269 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ssxa1B1AUS7 101 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gm3526E9PZM0 191 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Olfr220E9Q050 325 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Psma3O70435 255 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Surf2P09926 257 aaKnown RBP6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Scg5P12961 212 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ntrk2P15209 821 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ppm1bP36993 390 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Fitm2P59266 262 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Sirt6P59941 334 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Otx2P80206 289 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Rnf145Q5SWK7 663 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Egfl8Q6GUQ1 293 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Trim45Q6PFY8 580 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Olfr774Q7TRI5 312 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Scn3bQ8BHK2 215 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 GmppbQ8BTZ7 360 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ikzf4Q8C208 586 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 LaynQ8C351 381 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mettl21eQ8CDZ2 244 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mark4Q8CIP4 752 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Trpv3Q8K424 791 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mrps18cQ8R2L5 143 aaKnown RBP6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Fam20bQ8VCS3 409 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 VitQ8VHI5 650 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tex13bQ99MW5 186 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Zdhhc4Q9D6H5 343 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Hcar2Q9EP66 360 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Olfr630Q9EQQ7 319 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Kdelc1Q9JHP7 502 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Calm4Q9JM83 148 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Il18bpQ9Z0M9 193 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Padi4Q9Z183 666 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Cyp2a22B2RXZ2 492 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Vmn2r59E9PUT5 865 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 AU018091E9PWS4 684 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tsc22d2E9Q7M2 769 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gm8011K7N6Y5 207 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 PlauP06869 433 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 CfpP11680 464 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gsta1P13745 223 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Atp5jP97450 108 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Bex6Q3TZW7 114 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 B3gnt3Q5JCS9 372 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Zscan26Q5RJ54 466 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Soat1Q61263 540 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Grid2Q61625 1007 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Orai3Q6P8G8 290 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gsta1Q6P8Q0 223 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Paqr3Q6TCG8 311 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Dcaf12Q8BGZ3 453 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Pcdh20Q8BIZ0 952 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Eri3Q8C460 337 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Aph1bQ8C7N7 257 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Wdr37Q8CBE3 496 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Usp45Q8K387 813 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gstm4Q8R5I6 218 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Olfr809Q8VEX8 328 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Chil4Q91Z98 402 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Acy1Q99JW2 408 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Pole4Q9CQ36 118 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Acad8Q9D7B6 413 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Armc8Q9DBR3 673 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Phc2Q9QWH1 850 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Kcne5Q9QZ26 143 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ehd1Q9WVK4 534 aaKnown RBP6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Cib1Q9Z0F4 191 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ranbp2Q9ERU9 3053 aaKnown RBP6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Vmn2r-ps130A0A140T8U3 855 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Smim17A0A504 109 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ttll2A4Q9E4 540 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gm3755K7N743 167 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Nrp2O35375 931 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 MaffO54791 156 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 H2-Eb1P04230 264 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Bmp4P21275 408 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Serpinb5P70124 375 aaKnown RBP6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Kcnab3P97382 249 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Glt6d1Q2NKH9 311 aa6.59□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Riiad1Q3KNY5 119 aa6.59□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms