RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.64□□□□□ -0.55
LINC00339-213ENST00000642137 C1orf50Q9BV19 199 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 EBPLQ9BY08 206 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 TGIF2Q9GZN2 237 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 MKKSQ9NPJ1 570 aaPredicted RBP11.64□□□□□ -0.55
LINC00339-213ENST00000642137 ASCL3Q9NQ33 180 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 PRDM9Q9NQV7 894 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 SLC22A11Q9NSA0 550 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 AIG1Q9NVV5 245 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 FOXJ2Q9P0K8 574 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 FBXW2Q9UKT8 454 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 ACSL6Q9UKU0 697 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 TRIM33Q9UPN9 1127 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 MAPRE3Q9UPY8 281 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 DLGAP4Q9Y2H0 992 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 AK5Q9Y6K8 562 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 SPACA6W5XKT8 324 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 IGLV3-12A0A075B6K2 115 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 BLACEA4D250 179 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 ZNF860A6NHJ4 632 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 E9PBE3 544 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 CYR61O00622 381 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 KLHL41O60662 606 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 G6PDP11413 515 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 RNH1P13489 461 aaKnown RBP11.63□□□□□ -0.55
LINC00339-213ENST00000642137 DRD2P14416 443 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 IDO1P14902 403 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 CPN2P22792 545 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 TACR1P25103 407 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 BUD31P41223 144 aaPredicted RBP11.63□□□□□ -0.55
LINC00339-213ENST00000642137 MRPL19P49406 292 aaKnown RBP11.63□□□□□ -0.55
LINC00339-213ENST00000642137 ATP4BP51164 291 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 DIO3P55073 304 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 HNRNPH2P55795 449 aaKnown RBP11.63□□□□□ -0.55
LINC00339-213ENST00000642137 CLDN8P56748 225 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 TAS2R50P59544 299 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 OLR1P78380 273 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 C2orf80Q0P641 193 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 HEPACAMQ14CZ8 416 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 RPS6KA2Q15349 733 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 ARHGAP40Q5TG30 622 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 GKAP1Q5VSY0 366 aaPredicted RBP11.63□□□□□ -0.55
LINC00339-213ENST00000642137 FAM71E1Q6IPT2 247 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 MRPL14Q6P1L8 145 aaKnown RBP11.63□□□□□ -0.55
LINC00339-213ENST00000642137 IKBIPQ70UQ0 350 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 COX15Q7KZN9 410 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 NLGN4XQ8N0W4 816 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 TMEM132CQ8N3T6 1108 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 ESX1Q8N693 406 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 ANKS4BQ8N8V4 417 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 NLGN4YQ8NFZ3 816 aaPredicted RBP11.63□□□□□ -0.55
LINC00339-213ENST00000642137 BCAS4Q8TDM0 211 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 MR1Q95460 341 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 NXPE2Q96DL1 559 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 EGLN2Q96KS0 407 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 ZNF578Q96N58 590 aaPredicted RBP11.63□□□□□ -0.55
LINC00339-213ENST00000642137 OR1F2PQ96R84 312 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 YIPF2Q9BWQ6 316 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 FAIM2Q9BWQ8 316 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 FAM117AQ9C073 453 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 BRINP2Q9C0B6 783 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 SLC26A1Q9H2B4 701 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 RABEP2Q9H5N1 569 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 AKIRIN1Q9H9L7 192 aaPredicted RBP11.63□□□□□ -0.55
LINC00339-213ENST00000642137 MYNNQ9NPC7 610 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 THSD1Q9NS62 852 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 MRGBPQ9NV56 204 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 IFT80Q9P2H3 777 aaPredicted RBP11.63□□□□□ -0.55
LINC00339-213ENST00000642137 HEY2Q9UBP5 337 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 ZNF282Q9UDV7 671 aaPredicted RBP11.63□□□□□ -0.55
LINC00339-213ENST00000642137 BAIAP2L1Q9UHR4 511 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 ATG4BQ9Y4P1 393 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 GPR45Q9Y5Y3 372 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 FER1L5A0AVI2 2057 aa11.63□□□□□ -0.55
LINC00339-213ENST00000642137 A0A1W2PR48 441 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 C1orf226A1L170 272 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 VSTM2BA6NLU5 285 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 STMND1H3BQB6 276 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 PSMD12O00232 456 aaPredicted RBP11.62□□□□□ -0.55
LINC00339-213ENST00000642137 BRINP1O60477 761 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 PRMT3O60678 531 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 BMP10O95393 424 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 ADRB1P08588 477 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 RAB40ALP0C0E4 278 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 NCF2P19878 526 aaPredicted RBP11.62□□□□□ -0.55
LINC00339-213ENST00000642137 C21orf58P58505 322 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 MAT1AQ00266 395 aaKnown RBP11.62□□□□□ -0.55
LINC00339-213ENST00000642137 OCA2Q04671 838 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 KLC1Q07866 573 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 COL9A2Q14055 689 aaPredicted RBP11.62□□□□□ -0.55
LINC00339-213ENST00000642137 SYT16Q17RD7 645 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 PDCD4Q53EL6 469 aaKnown RBP11.62□□□□□ -0.55
LINC00339-213ENST00000642137 TMEM198Q66K66 360 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 LCN10Q6JVE6 187 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 CLNKQ7Z7G1 428 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 DTX1Q86Y01 620 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 CPSF7Q8N684 471 aaKnown RBP11.62□□□□□ -0.55
LINC00339-213ENST00000642137 EFCAB3Q8N7B9 438 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 C7orf57Q8NEG2 295 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 TANKQ92844 425 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms