RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 PBX4Q9BYU1 374 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 GPN2Q9H9Y4 310 aaPredicted RBP16.26■□□□□ 0.19
PHGDH-211ENST00000641213 ZNF451Q9Y4E5 1061 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 PRR23AA6NEV1 266 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 NDUFS4O43181 175 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 LCMT2O60294 686 aaKnown RBP16.26■□□□□ 0.19
PHGDH-211ENST00000641213 TIE1P35590 1138 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 ALDH9A1P49189 494 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 GP2P55259 537 aaKnown RBP16.26■□□□□ 0.19
PHGDH-211ENST00000641213 SEC13P55735 322 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 DSTNP60981 165 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 CSNK1G2P78368 415 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 SMN1Q16637 294 aaKnown RBP16.26■□□□□ 0.19
PHGDH-211ENST00000641213 CYP27C1Q4G0S4 372 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 OR4C15Q8NGM1 316 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 FAR1Q8WVX9 515 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 OR5P2Q8WZ92 322 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 UBE2FQ969M7 185 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 HRASLS5Q96KN8 279 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 CAMK1GQ96NX5 476 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 FEVQ99581 238 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 RPP25Q9BUL9 199 aaKnown RBP16.26■□□□□ 0.19
PHGDH-211ENST00000641213 FUNDC2Q9BWH2 189 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 C1QTNF2Q9BXJ5 285 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 WARS2Q9UGM6 360 aaKnown RBP16.26■□□□□ 0.19
PHGDH-211ENST00000641213 KCNK6Q9Y257 313 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 ANGPT4Q9Y264 503 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 PDPK1O15530 556 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 FOXD2O60548 495 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-211ENST00000641213 DNAJB5O75953 348 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 IFNA14P01570 189 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 HTR1BP28222 390 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 GALK1P51570 392 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 MANFP55145 182 aaKnown RBP16.25■□□□□ 0.19
PHGDH-211ENST00000641213 SPIBQ01892 262 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 SGCGQ13326 291 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 HEPACAMQ14CZ8 416 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 NPTX1Q15818 432 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 SAXO2Q658L1 398 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 ZNF776Q68DI1 518 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-211ENST00000641213 KIAA1161Q6NSJ0 714 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 RAB42Q8N4Z0 105 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 RGMAQ96B86 450 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 ELSPBP1Q96BH3 223 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 QRFPRQ96P65 431 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 TIMM29Q9BSF4 260 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 XKR8Q9H6D3 395 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 SCN3BQ9NY72 215 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 PLEKHM1Q9Y4G2 1056 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 GOLGA4Q13439 2230 aaKnown RBP16.25■□□□□ 0.19
PHGDH-211ENST00000641213 IGKV1-8A0A0C4DH67 115 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 PRAMEF33A0A0G2JMD5 474 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 ZNF99A8MXY4 864 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-211ENST00000641213 K7EQS6 105 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 TMPRSS11DO60235 418 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 PRAMEF10O60809 474 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 CEACAM5P06731 702 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 ZNF182P17025 639 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-211ENST00000641213 ITGA2P17301 1181 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 CD6P30203 668 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 KIR2DL1P43626 348 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-211ENST00000641213 ENTPD1P49961 510 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 CDH12P55289 794 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 RPS21P63220 83 aaKnown RBP16.25■□□□□ 0.19
PHGDH-211ENST00000641213 KIAA1211LQ6NV74 962 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 SLC16A12Q6ZSM3 486 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 UBE3DQ7Z6J8 389 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 NUDT13Q86X67 352 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 PLD3Q8IV08 490 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 SLC30A8Q8IWU4 369 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 SLC5A8Q8N695 610 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 NATD1Q8N6N6 113 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 SMYD1Q8NB12 490 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 OR52J3Q8NH60 311 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 GEMIN6Q8WXD5 167 aaKnown RBP16.25■□□□□ 0.19
PHGDH-211ENST00000641213 EZH1Q92800 747 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-211ENST00000641213 TANKQ92844 425 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 NEURL3Q96EH8 262 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 KCNC2Q96PR1 638 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 RHNO1Q9BSD3 238 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 BTBD1Q9H0C5 482 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 RASSF1Q9NS23 344 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 IMP3Q9NV31 184 aaKnown RBP16.25■□□□□ 0.19
PHGDH-211ENST00000641213 FBXL12Q9NXK8 326 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 C5AR2Q9P296 337 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 PSME2Q9UL46 239 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 PCDHGA6Q9Y5G7 932 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 PCDHGA10Q9Y5H3 936 aa16.25■□□□□ 0.19
PHGDH-211ENST00000641213 PCDHGA12O60330 932 aa16.24■□□□□ 0.19
PHGDH-211ENST00000641213 NDUFS2O75306 463 aa16.24■□□□□ 0.19
PHGDH-211ENST00000641213 WBP4O75554 376 aaKnown RBP16.24■□□□□ 0.19
PHGDH-211ENST00000641213 RAB28P51157 221 aa16.24■□□□□ 0.19
PHGDH-211ENST00000641213 PCBP4P57723 403 aaKnown RBP16.24■□□□□ 0.19
PHGDH-211ENST00000641213 RPS26P62854 115 aaKnown RBP16.24■□□□□ 0.19
PHGDH-211ENST00000641213 PRDX1Q06830 199 aaKnown RBP16.24■□□□□ 0.19
PHGDH-211ENST00000641213 CLCA4Q14CN2 919 aa16.24■□□□□ 0.19
PHGDH-211ENST00000641213 PROX2Q3B8N5 592 aa16.24■□□□□ 0.19
PHGDH-211ENST00000641213 GPR153Q6NV75 609 aa16.24■□□□□ 0.19
PHGDH-211ENST00000641213 ANKRD54Q6NXT1 300 aa16.24■□□□□ 0.19
PHGDH-211ENST00000641213 CEACAM20Q6UY09 585 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms