RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 RTN4RL1Q86UN2 441 aaPredicted RBP16.86■□□□□ 0.29
SCARB2-223ENST00000640640 NRROSQ86YC3 692 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 SPATA9Q9BWV2 254 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 ARMC1Q9NVT9 282 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 VAPAQ9P0L0 249 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 MED31Q9Y3C7 131 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 GPC6Q9Y625 555 aaPredicted RBP16.86■□□□□ 0.29
SCARB2-223ENST00000640640 H7C0S8 307 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 ECDO95905 644 aaPredicted RBP16.86■□□□□ 0.29
SCARB2-223ENST00000640640 GM2AP17900 193 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 ATP5A1P25705 553 aaKnown RBP16.86■□□□□ 0.29
SCARB2-223ENST00000640640 LRP8Q14114 963 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 HNRNPA1L2Q32P51 320 aaKnown RBP16.86■□□□□ 0.29
SCARB2-223ENST00000640640 MSANTD1Q6ZTZ1 278 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 CYP4V2Q6ZWL3 525 aaPredicted RBP16.86■□□□□ 0.29
SCARB2-223ENST00000640640 VTCN1Q7Z7D3 282 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 TMEM45AQ9NWC5 275 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 ING4Q9UNL4 249 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 GPR45Q9Y5Y3 372 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 ZNF182P17025 639 aaPredicted RBP16.86■□□□□ 0.29
SCARB2-223ENST00000640640 TCEA1P23193 301 aaKnown RBP16.86■□□□□ 0.29
SCARB2-223ENST00000640640 RPS26P62854 115 aaKnown RBP16.86■□□□□ 0.29
SCARB2-223ENST00000640640 HSDL2Q6YN16 418 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 ASPGQ86U10 573 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 MOAP1Q96BY2 351 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 TMCO6Q96DC7 493 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 EHD1Q9H4M9 534 aa16.86■□□□□ 0.29
SCARB2-223ENST00000640640 LINGO3P0C6S8 592 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 CSNK1DP48730 415 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 ZNF33BQ06732 778 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 CBX3Q13185 183 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 KLHL24Q6TFL4 600 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 ZNF527Q8NB42 609 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 JPH3Q8WXH2 748 aaPredicted RBP16.85■□□□□ 0.29
SCARB2-223ENST00000640640 NCSTNQ92542 709 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 EFHD2Q96C19 240 aaPredicted RBP16.85■□□□□ 0.29
SCARB2-223ENST00000640640 SLC17A9Q9BYT1 436 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 ZNF696Q9H7X3 374 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 NUAK1O60285 661 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 UGDHO60701 494 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 GABBR2O75899 941 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 ZNF3P17036 446 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 ARFIP1P53367 373 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 LIPIQ6XZB0 460 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 LMX1AQ8TE12 382 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 ISOC1Q96CN7 298 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 NTMT1Q9BV86 223 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 MAGIXQ9H6Y5 334 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 FZD3Q9NPG1 666 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 MALT1Q9UDY8 824 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 PRSS21Q9Y6M0 314 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 CCKBRP32239 447 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 PPP2R2BQ00005 443 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 CATSPEREQ5SY80 951 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 PEG10Q86TG7 708 aaKnown RBP16.85■□□□□ 0.29
SCARB2-223ENST00000640640 AMIGO1Q86WK6 493 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 BBS10Q8TAM1 723 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 TAMM41Q96BW9 452 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 PIP5K1AQ99755 562 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.85■□□□□ 0.29
SCARB2-223ENST00000640640 C1orf226A1L170 272 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 CPED1A4D0V7 1026 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 MAGEB3O15480 346 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 ZNF821O75541 412 aaPredicted RBP16.85■□□□□ 0.29
SCARB2-223ENST00000640640 FAUP35544 74 aaKnown RBP16.85■□□□□ 0.29
SCARB2-223ENST00000640640 ADNP2Q6IQ32 1131 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 UBE2J2Q8N2K1 259 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 SHKBP1Q8TBC3 707 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 RNF6Q9Y252 685 aa16.85■□□□□ 0.29
SCARB2-223ENST00000640640 C2orf74A8MZ97 194 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 LATO43561 262 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 RAB25P57735 213 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 TUBA1BP68363 451 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 ST3GAL4Q11206 333 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 NPRL3Q12980 569 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 RAB39AQ14964 217 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 CMPK2Q5EBM0 449 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 TUBA1AQ71U36 451 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 NUP54Q7Z3B4 507 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 NRG4Q8WWG1 115 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 TRNT1Q96Q11 434 aaKnown RBP16.84■□□□□ 0.29
SCARB2-223ENST00000640640 SLC29A1Q99808 456 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 NDC1Q9BTX1 674 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 TMEM30AQ9NV96 361 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 FAM118AQ9NWS6 357 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 KLHL42Q9P2K6 505 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 CLPXO76031 633 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 SDC1P18827 310 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 HLCSP50747 726 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 LBX1P52954 281 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 RAB15P59190 212 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 ZNF234Q14588 700 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 GINS1Q14691 196 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 CTSL3PQ5NE16 218 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 MND1Q9BWT6 205 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 ITGB1BP2Q9UKP3 347 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 CPNE3O75131 537 aaKnown RBP16.84■□□□□ 0.29
SCARB2-223ENST00000640640 FHP07954 510 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 IFI30P13284 250 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 CEBPBP17676 345 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms