RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 ZNF10P21506 573 aaPredicted RBP25.07■■□□□ 1.6
VEGFA-231ENST00000640499 JAK1P23458 1154 aa25.07■■□□□ 1.6
VEGFA-231ENST00000640499 AP5B1Q2VPB7 878 aa25.07■■□□□ 1.6
VEGFA-231ENST00000640499 CEP85LQ5SZL2 805 aa25.07■■□□□ 1.6
VEGFA-231ENST00000640499 EXOC3L1Q86VI1 746 aa25.07■■□□□ 1.6
VEGFA-231ENST00000640499 CCDC63Q8NA47 563 aa25.07■■□□□ 1.6
VEGFA-231ENST00000640499 FAM47BQ8NA70 645 aa25.07■■□□□ 1.6
VEGFA-231ENST00000640499 AGAP11Q8TF27 550 aa25.07■■□□□ 1.6
VEGFA-231ENST00000640499 PSMF1Q92530 271 aa25.07■■□□□ 1.6
VEGFA-231ENST00000640499 FAM111AQ96PZ2 611 aa25.07■■□□□ 1.6
VEGFA-231ENST00000640499 ROGDIQ9GZN7 287 aa25.07■■□□□ 1.6
VEGFA-231ENST00000640499 COPS7BQ9H9Q2 264 aaPredicted RBP25.07■■□□□ 1.6
VEGFA-231ENST00000640499 EIF4E1BA6NMX2 242 aaKnown RBP25.06■■□□□ 1.6
VEGFA-231ENST00000640499 PSMD12O00232 456 aaPredicted RBP25.06■■□□□ 1.6
VEGFA-231ENST00000640499 MANBAO00462 879 aa25.06■■□□□ 1.6
VEGFA-231ENST00000640499 ITGA3P26006 1051 aa25.06■■□□□ 1.6
VEGFA-231ENST00000640499 SSR2P43308 183 aa25.06■■□□□ 1.6
VEGFA-231ENST00000640499 PGDP52209 483 aa25.06■■□□□ 1.6
VEGFA-231ENST00000640499 ARFIP1P53367 373 aa25.06■■□□□ 1.6
VEGFA-231ENST00000640499 FOXA1P55317 472 aa25.06■■□□□ 1.6
VEGFA-231ENST00000640499 IFT88Q13099 833 aa25.06■■□□□ 1.6
VEGFA-231ENST00000640499 SLAMF1Q13291 335 aa25.06■■□□□ 1.6
VEGFA-231ENST00000640499 SFT2D3Q587I9 215 aa25.06■■□□□ 1.6
VEGFA-231ENST00000640499 TTC19Q6DKK2 380 aaPredicted RBP25.06■■□□□ 1.6
VEGFA-231ENST00000640499 FRMD7Q6ZUT3 714 aa25.06■■□□□ 1.6
VEGFA-231ENST00000640499 THOC3Q96J01 351 aaKnown RBP25.06■■□□□ 1.6
VEGFA-231ENST00000640499 VPS50Q96JG6 964 aa25.06■■□□□ 1.6
VEGFA-231ENST00000640499 MAGEB10Q96LZ2 347 aaPredicted RBP25.06■■□□□ 1.6
VEGFA-231ENST00000640499 KCNA7Q96RP8 456 aa25.06■■□□□ 1.6
VEGFA-231ENST00000640499 ELOVL6Q9H5J4 265 aa25.06■■□□□ 1.6
VEGFA-231ENST00000640499 DDX31Q9H8H2 851 aaKnown RBP25.06■■□□□ 1.6
VEGFA-231ENST00000640499 PRDM9Q9NQV7 894 aa25.06■■□□□ 1.6
VEGFA-231ENST00000640499 A0A0A6YYD5 115 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 TCRBV16S1A1N1A0A5B0 115 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 RGS16O15492 202 aaPredicted RBP25.05■■□□□ 1.6
VEGFA-231ENST00000640499 TMPRSS11DO60235 418 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 PRR35P0CG20 571 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 CHN1P15882 459 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 ALDH3A1P30838 453 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 TSFMP43897 325 aaKnown RBP25.05■■□□□ 1.6
VEGFA-231ENST00000640499 HTR6P50406 440 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 PKNOX1P55347 436 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 HNRNPH2P55795 449 aaKnown RBP25.05■■□□□ 1.6
VEGFA-231ENST00000640499 PHEXP78562 749 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 COLEC12Q5KU26 742 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 C10orf62Q5T681 223 aaPredicted RBP25.05■■□□□ 1.6
VEGFA-231ENST00000640499 LIPMQ5VYY2 423 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 MRM1Q6IN84 353 aaKnown RBP25.05■■□□□ 1.6
VEGFA-231ENST00000640499 LRIG3Q6UXM1 1119 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 ZCCHC7Q8N3Z6 543 aaKnown RBP25.05■■□□□ 1.6
VEGFA-231ENST00000640499 SMC6Q96SB8 1091 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 HBEGFQ99075 208 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 SERPINI1Q99574 410 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 MECRQ9BV79 373 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 GATA5Q9BWX5 397 aaPredicted RBP25.05■■□□□ 1.6
VEGFA-231ENST00000640499 LHPPQ9H008 270 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 PRM3Q9NNZ6 103 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 RIC8BQ9NVN3 520 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 MMACHCQ9Y4U1 282 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 TIMM22Q9Y584 194 aa25.05■■□□□ 1.6
VEGFA-231ENST00000640499 SPTA1P02549 2419 aa25.04■■□□□ 1.6
VEGFA-231ENST00000640499 B8ZZF3 427 aa25.04■■□□□ 1.6
VEGFA-231ENST00000640499 ESRRBO95718 433 aa25.04■■□□□ 1.6
VEGFA-231ENST00000640499 SERPINA7P05543 415 aa25.04■■□□□ 1.6
VEGFA-231ENST00000640499 ETV4P43268 484 aa25.04■■□□□ 1.6
VEGFA-231ENST00000640499 RAP1GDS1P52306 607 aa25.04■■□□□ 1.6
VEGFA-231ENST00000640499 VWA5B1Q5TIE3 1220 aa25.04■■□□□ 1.6
VEGFA-231ENST00000640499 KBTBD2Q8IY47 623 aa25.04■■□□□ 1.6
VEGFA-231ENST00000640499 SELENOMQ8WWX9 145 aa25.04■■□□□ 1.6
VEGFA-231ENST00000640499 TUBB6Q9BUF5 446 aa25.04■■□□□ 1.6
VEGFA-231ENST00000640499 MRPL1Q9BYD6 325 aaKnown RBP25.04■■□□□ 1.6
VEGFA-231ENST00000640499 SLC29A3Q9BZD2 475 aa25.04■■□□□ 1.6
VEGFA-231ENST00000640499 MID1IP1Q9NPA3 183 aa25.04■■□□□ 1.6
VEGFA-231ENST00000640499 PRTFDC1Q9NRG1 225 aa25.04■■□□□ 1.6
VEGFA-231ENST00000640499 FBXW2Q9UKT8 454 aa25.04■■□□□ 1.6
VEGFA-231ENST00000640499 SNX6Q9UNH7 406 aa25.04■■□□□ 1.6
VEGFA-231ENST00000640499 ATG4BQ9Y4P1 393 aa25.04■■□□□ 1.6
VEGFA-231ENST00000640499 ASB4Q9Y574 426 aa25.04■■□□□ 1.6
VEGFA-231ENST00000640499 CTIFO43310 598 aaKnown RBP25.03■■□□□ 1.6
VEGFA-231ENST00000640499 SEMA3DO95025 777 aa25.03■■□□□ 1.6
VEGFA-231ENST00000640499 PPP2R1BP30154 601 aa25.03■■□□□ 1.6
VEGFA-231ENST00000640499 CD97P48960 835 aa25.03■■□□□ 1.6
VEGFA-231ENST00000640499 HSD17B7P56937 341 aa25.03■■□□□ 1.6
VEGFA-231ENST00000640499 OR4D2P58180 307 aa25.03■■□□□ 1.6
VEGFA-231ENST00000640499 TBL3Q12788 808 aaKnown RBP25.03■■□□□ 1.6
VEGFA-231ENST00000640499 PAPD4Q6PIY7 484 aaKnown RBP25.03■■□□□ 1.6
VEGFA-231ENST00000640499 ATG14Q6ZNE5 492 aa25.03■■□□□ 1.6
VEGFA-231ENST00000640499 ZNF595Q8IYB9 648 aa25.03■■□□□ 1.6
VEGFA-231ENST00000640499 METTL6Q8TCB7 284 aa25.03■■□□□ 1.6
VEGFA-231ENST00000640499 ADAMTS18Q8TE60 1221 aa25.03■■□□□ 1.6
VEGFA-231ENST00000640499 C19orf25Q9UFG5 118 aaPredicted RBP25.03■■□□□ 1.6
VEGFA-231ENST00000640499 ZNF451Q9Y4E5 1061 aa25.03■■□□□ 1.6
VEGFA-231ENST00000640499 PCDHGB7Q9Y5F8 929 aa25.03■■□□□ 1.6
VEGFA-231ENST00000640499 WASHC1A8K0Z3 465 aa25.02■■□□□ 1.6
VEGFA-231ENST00000640499 TRIM13O60858 407 aa25.02■■□□□ 1.6
VEGFA-231ENST00000640499 ERLIN1O75477 346 aa25.02■■□□□ 1.6
VEGFA-231ENST00000640499 PRKRAO75569 313 aaKnown RBP25.02■■□□□ 1.6
VEGFA-231ENST00000640499 GBAP04062 536 aa25.02■■□□□ 1.6
VEGFA-231ENST00000640499 ITGAMP11215 1152 aa25.02■■□□□ 1.6
VEGFA-231ENST00000640499 GALNT1Q10472 559 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms