RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 TP63Q9H3D4 680 aaPredicted RBP15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 BRF2Q9HAW0 419 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 HCFC1R1Q9NWW0 138 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 FBXL12Q9NXK8 326 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 PLAGL1Q9UM63 463 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 PPIL1Q9Y3C6 166 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 SERTM1A2A2V5 107 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 H3BN98 237 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 NPC1O15118 1278 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 IL3P08700 152 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 HNRNPFP52597 415 aaKnown RBP15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 PRKCDQ05655 676 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 TMEM115Q12893 351 aaPredicted RBP15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 GRIN2CQ14957 1233 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 OLIG3Q7RTU3 272 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 C11orf74Q86VG3 221 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 C16orf78Q8WTQ4 265 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 SNTG1Q9NSN8 517 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 PEX16Q9Y5Y5 336 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 A0A1W2PRB8 838 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 TFECO14948 347 aaPredicted RBP15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 PTTG1O95997 202 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 FURINP09958 794 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 XCR1P46094 333 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 ALDH9A1P49189 494 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 LIM2P55344 173 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 PRMT2P55345 433 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 IFITM2Q01629 132 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 ZNF284Q2VY69 593 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 SZRD1Q7Z422 152 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 NRARPQ7Z6K4 114 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 GEMIN6Q8WXD5 167 aaKnown RBP15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 DMRTB1Q96MA1 342 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 CTRCQ99895 268 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 ABCG4Q9H172 646 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 NEK6Q9HC98 313 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 HELZP42694 1942 aaKnown RBP15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 ZNF197O14709 1029 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 GRM6O15303 877 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 DYRK3O43781 588 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 ATG13O75143 517 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 APOL3O95236 402 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 BCHEP06276 602 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 TNFSF8P32971 234 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 POLR2LP62875 67 aaKnown RBP15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 BCL2A1Q16548 175 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 FBXO43Q4G163 708 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 FRMPD2BQ6IN97 320 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 TRIM40Q6P9F5 258 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 TUBA3EQ6PEY2 450 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 TRAPPC5Q8IUR0 188 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 TCEAL8Q8IYN2 117 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 OTUB1Q96FW1 271 aaPredicted RBP15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 TRMT61AQ96FX7 289 aaKnown RBP15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 FOPNLQ96NB1 174 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 C19orf43Q9BQ61 176 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 SPATA9Q9BWV2 254 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 BHLHE41Q9C0J9 482 aaPredicted RBP15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 SLC6A16Q9GZN6 736 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 NXF2Q9GZY0 626 aaKnown RBP15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 SPG21Q9NZD8 308 aa15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 CCDC59Q9P031 241 aaKnown RBP15.8■□□□□ 0.12
HNRNPU-228ENST00000640306 CCRL2O00421 344 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 FFAR1O14842 300 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 MFN2O95140 757 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 NPPBP16860 134 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 VIPR1P32241 457 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 RPS19P39019 145 aaKnown RBP15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 METAP1P53582 386 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 CRISP1P54107 249 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 KCNC3Q14003 757 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 PUM1Q14671 1186 aaKnown RBP eCLIP15.79■□□□□ 0.126e-21■□□□□ 10.4
HNRNPU-228ENST00000640306 TMEM215Q68D42 235 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 ATCAYQ86WG3 371 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 UBE2J2Q8N2K1 259 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 OR56A3Q8NH54 315 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 GPR151Q8TDV0 419 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 TMEM203Q969S6 136 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 AP2M1Q96CW1 435 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 WFDC6Q9BQY6 131 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 ASPNQ9BXN1 380 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 CPEB1Q9BZB8 566 aaKnown RBP15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 MIEF1Q9NQG6 463 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 DDX28Q9NUL7 540 aaKnown RBP15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 CLN6Q9NWW5 311 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 TAS2R9Q9NYW1 312 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 PRKAB1Q9Y478 270 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 CKAP5Q14008 2032 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 TRAV19A0A0A6YYK7 116 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 PIPSLA2A3N6 862 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 LRRTM2O43300 516 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 DPM1O60762 260 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 RECKO95980 971 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 APOA1P02647 267 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 IFNW1P05000 195 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 ITGA2P17301 1181 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 SLC15A1P46059 708 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 IRF3Q14653 427 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 C1QTNF12Q5T7M4 302 aa15.79■□□□□ 0.12
HNRNPU-228ENST00000640306 HENMT1Q5T8I9 393 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms