RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 THAP1Q9NVV9 213 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 NMRK1Q9NWW6 199 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 AHSPQ9NZD4 102 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 KCMF1Q9P0J7 381 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 C3orf18Q9UK00 162 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 MKL2Q9ULH7 1088 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 CCL27Q9Y4X3 112 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 IDSB3KWA1 339 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 K7ENP7 123 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 PSMD12O00232 456 aaPredicted RBP12.44□□□□□ -0.42
GTF3A-209ENST00000640289 KLF11O14901 512 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 PRKRAO75569 313 aaKnown RBP12.44□□□□□ -0.42
GTF3A-209ENST00000640289 JUNP05412 331 aaKnown RBP12.44□□□□□ -0.42
GTF3A-209ENST00000640289 HEXBP07686 556 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 CPN2P22792 545 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 OTX2P32243 289 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 RPL14P50914 215 aaKnown RBP12.44□□□□□ -0.42
GTF3A-209ENST00000640289 EMP2P54851 167 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 UCNP55089 124 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 HNRNPH2P55795 449 aaKnown RBP12.44□□□□□ -0.42
GTF3A-209ENST00000640289 RAE1P78406 368 aaKnown RBP12.44□□□□□ -0.42
GTF3A-209ENST00000640289 BTG2P78543 158 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 OCRLQ01968 901 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 CDC20Q12834 499 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 SSPNQ14714 243 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 PDCD2Q16342 344 aaPredicted RBP12.44□□□□□ -0.42
GTF3A-209ENST00000640289 SPDYAQ5MJ70 313 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 MRM1Q6IN84 353 aaKnown RBP12.44□□□□□ -0.42
GTF3A-209ENST00000640289 INO80CQ6PI98 192 aaPredicted RBP12.44□□□□□ -0.42
GTF3A-209ENST00000640289 EFCAB3Q8N7B9 438 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 ZSCAN1Q8NBB4 408 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 ADAMTS17Q8TE56 1095 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 PPP1R36Q96LQ0 422 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 C3orf30Q96M34 536 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 OR1F2PQ96R84 312 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 LYRM4Q9HD34 91 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 GIMAP2Q9UG22 337 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 HAO1Q9UJM8 370 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.44□□□□□ -0.42
GTF3A-209ENST00000640289 ATG4BQ9Y4P1 393 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 APC2O95996 2303 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 AHCTF1Q8WYP5 2266 aa12.44□□□□□ -0.42
GTF3A-209ENST00000640289 SLC28A1O00337 649 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 CYR61O00622 381 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 RGS14O43566 566 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 RSL1D1O76021 490 aaKnown RBP12.43□□□□□ -0.42
GTF3A-209ENST00000640289 SNUPNO95149 360 aaKnown RBP12.43□□□□□ -0.42
GTF3A-209ENST00000640289 RECKO95980 971 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 FAM58BPP0C7Q3 252 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 KITP10721 976 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 IL10P22301 178 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 MC1RQ01726 317 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 RHAGQ02094 409 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 ACSM2AQ08AH3 577 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 VAC14Q08AM6 782 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 NR6A1Q15406 480 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 UGT8Q16880 541 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 TUBB8Q3ZCM7 444 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 XKR7Q5GH72 579 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 CCNYL2Q5T2Q4 361 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 ACSM2BQ68CK6 577 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 C18orf63Q68DL7 685 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 CYP20A1Q6UW02 462 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 RIPOR1Q6ZS17 1223 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 RNF165Q6ZSG1 346 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 PAGE2Q7Z2X7 111 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 PPP1R32Q7Z5V6 425 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 GPR180Q86V85 440 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 LRRC8CQ8TDW0 803 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 CKAP2Q8WWK9 683 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 TSLPQ969D9 159 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 UCN3Q969E3 161 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 C8orf44Q96CB5 159 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 EBPLQ9BY08 206 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 LYARQ9NX58 379 aaKnown RBP12.43□□□□□ -0.42
GTF3A-209ENST00000640289 TEX10Q9NXF1 929 aaPredicted RBP12.43□□□□□ -0.42
GTF3A-209ENST00000640289 MARCOQ9UEW3 520 aaPredicted RBP12.43□□□□□ -0.42
GTF3A-209ENST00000640289 ADAM29Q9UKF5 820 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 POLR3HQ9Y535 204 aaPredicted RBP12.43□□□□□ -0.42
GTF3A-209ENST00000640289 ASB4Q9Y574 426 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 SCN3AQ9NY46 2000 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 CELSR3Q9NYQ7 3312 aa12.43□□□□□ -0.42
GTF3A-209ENST00000640289 MYOCOSA0A1B0GUC4 107 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 ATP6AP2A0A1C7CYW4 349 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 ARHGAP10A1A4S6 786 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 WASHC1A8K0Z3 465 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 MASP2O00187 686 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 SOCS6O14544 535 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 LSM1O15116 133 aaKnown RBP12.42□□□□□ -0.42
GTF3A-209ENST00000640289 PCDH7O60245 1069 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 ALOX12BO75342 701 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 SEC22BO75396 215 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 ATP6AP2O75787 350 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 MAOAP21397 527 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 JAK1P23458 1154 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 MMP11P24347 488 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 TIA1P31483 386 aaKnown RBP eCLIP12.42□□□□□ -0.42
GTF3A-209ENST00000640289 MAPK12P53778 367 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 ATP1A4Q13733 1029 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 GALNTL6Q49A17 601 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms