RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 CRLF3Q8IUI8 442 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 BEST3Q8N1M1 668 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 L3MBTL4Q8NA19 623 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 NFAM1Q8NET5 270 aaPredicted RBP16.58■□□□□ 0.24
PTPN11-207ENST00000639857 SLX1AQ9BQ83 275 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 MRPL57Q9BQC6 102 aaKnown RBP16.58■□□□□ 0.24
PTPN11-207ENST00000639857 MRPL46Q9H2W6 279 aaKnown RBP16.58■□□□□ 0.24
PTPN11-207ENST00000639857 IPPKQ9H8X2 491 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 ADAP2Q9NPF8 381 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 PSD3Q9NYI0 1048 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 XPR1Q9UBH6 696 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 PPT2Q9UMR5 302 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 SVILO95425 2214 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 SMIM24O75264 130 aa16.57■□□□□ 0.24
PTPN11-207ENST00000639857 HIST1H1TP22492 207 aaPredicted RBP16.57■□□□□ 0.24
PTPN11-207ENST00000639857 ATP5A1P25705 553 aaKnown RBP16.57■□□□□ 0.24
PTPN11-207ENST00000639857 SLC13A2Q13183 592 aa16.57■□□□□ 0.24
PTPN11-207ENST00000639857 MRPL49Q13405 166 aaKnown RBP16.57■□□□□ 0.24
PTPN11-207ENST00000639857 AP5B1Q2VPB7 878 aa16.57■□□□□ 0.24
PTPN11-207ENST00000639857 DEPDC1Q5TB30 811 aa16.57■□□□□ 0.24
PTPN11-207ENST00000639857 UBE3DQ7Z6J8 389 aa16.57■□□□□ 0.24
PTPN11-207ENST00000639857 CYP4X1Q8N118 509 aa16.57■□□□□ 0.24
PTPN11-207ENST00000639857 HORMAD2Q8N7B1 307 aa16.57■□□□□ 0.24
PTPN11-207ENST00000639857 PTGR2Q8N8N7 351 aaPredicted RBP16.57■□□□□ 0.24
PTPN11-207ENST00000639857 ACOT4Q8N9L9 421 aa16.57■□□□□ 0.24
PTPN11-207ENST00000639857 B3GNT7Q8NFL0 401 aa16.57■□□□□ 0.24
PTPN11-207ENST00000639857 HUS1BQ8NHY5 278 aa16.57■□□□□ 0.24
PTPN11-207ENST00000639857 MAGEB10Q96LZ2 347 aaPredicted RBP16.57■□□□□ 0.24
PTPN11-207ENST00000639857 UTP23Q9BRU9 249 aaKnown RBP16.57■□□□□ 0.24
PTPN11-207ENST00000639857 TXLNGYQ9BZA5 131 aa16.57■□□□□ 0.24
PTPN11-207ENST00000639857 DMRT3Q9NQL9 472 aa16.57■□□□□ 0.24
PTPN11-207ENST00000639857 MS4A12Q9NXJ0 267 aa16.57■□□□□ 0.24
PTPN11-207ENST00000639857 KCMF1Q9P0J7 381 aa16.57■□□□□ 0.24
PTPN11-207ENST00000639857 CLDN16Q9Y5I7 305 aa16.57■□□□□ 0.24
PTPN11-207ENST00000639857 SETXQ7Z333 2677 aaKnown RBP16.57■□□□□ 0.24
PTPN11-207ENST00000639857 COL12A1Q99715 3063 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 CTNSO60931 367 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 AGFG2O95081 481 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 CRYABP02511 175 aaKnown RBP16.56■□□□□ 0.24
PTPN11-207ENST00000639857 RHOXF2BP0C7M4 288 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 CUL3Q13618 768 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 TUBA3CQ13748 450 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 ZNF324BQ6AW86 544 aaPredicted RBP16.56■□□□□ 0.24
PTPN11-207ENST00000639857 TUBA3EQ6PEY2 450 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 ZNF793Q6ZN11 406 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 RPS19BP1Q86WX3 136 aaKnown RBP16.56■□□□□ 0.24
PTPN11-207ENST00000639857 MYLK4Q86YV6 388 aaPredicted RBP16.56■□□□□ 0.24
PTPN11-207ENST00000639857 ZCCHC7Q8N3Z6 543 aaKnown RBP16.56■□□□□ 0.24
PTPN11-207ENST00000639857 FAM47BQ8NA70 645 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 MDS2Q8NDY4 140 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 DNAJB8Q8NHS0 232 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 UHMK1Q8TAS1 419 aaKnown RBP16.56■□□□□ 0.24
PTPN11-207ENST00000639857 RGMAQ96B86 450 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 SCYL1Q96KG9 808 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 NPAS2Q99743 824 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 RHOXF2Q9BQY4 288 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 NTMT1Q9BV86 223 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 L2HGDHQ9H9P8 463 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 OLAHQ9NV23 265 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 ZNF358Q9NW07 568 aa16.56■□□□□ 0.24
PTPN11-207ENST00000639857 IQANK1A0A1B0GTG1 560 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 GABRR3A8MPY1 467 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 FOXE1O00358 373 aaPredicted RBP16.55■□□□□ 0.24
PTPN11-207ENST00000639857 RASAL1O95294 804 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 SIX3O95343 332 aaPredicted RBP16.55■□□□□ 0.24
PTPN11-207ENST00000639857 CLDN9O95484 217 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 TGFB1P01137 390 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 PTX3P26022 381 aaPredicted RBP16.55■□□□□ 0.24
PTPN11-207ENST00000639857 GCAP28676 217 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 EEF1DP29692 281 aaKnown RBP16.55■□□□□ 0.24
PTPN11-207ENST00000639857 SSR2P43308 183 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 CLCN2P51788 898 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 RAP1GDS1P52306 607 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 SERTAD2Q14140 314 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 ELAVL1Q15717 326 aaKnown RBP16.55■□□□□ 0.24
PTPN11-207ENST00000639857 GGTA1PQ4G0N0 100 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 OR4C11Q6IEV9 310 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 APCDD1LQ8NCL9 501 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 TMEM52Q8NDY8 209 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 ACMSDQ8TDX5 336 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.55■□□□□ 0.24
PTPN11-207ENST00000639857 NR4A3Q92570 626 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 VMP1Q96GC9 406 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 CSF3RQ99062 836 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 C1QTNF3Q9BXJ4 246 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 TRIM45Q9H8W5 580 aaPredicted RBP16.55■□□□□ 0.24
PTPN11-207ENST00000639857 PRM3Q9NNZ6 103 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 PHF11Q9UIL8 331 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 PCTPQ9UKL6 214 aa16.55■□□□□ 0.24
PTPN11-207ENST00000639857 LRRC14BA6NHZ5 514 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 FCHO1O14526 889 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 MYO1DO94832 1006 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 SEMA3DO95025 777 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 DDAH2O95865 285 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 HNRNPFP52597 415 aaKnown RBP16.54■□□□□ 0.24
PTPN11-207ENST00000639857 BIKQ13323 160 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 DDX39BQ13838 428 aaKnown RBP16.54■□□□□ 0.24
PTPN11-207ENST00000639857 CPSF6Q16630 551 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTPN11-207ENST00000639857 EIF2S3LQ2VIR3 472 aaKnown RBP16.54■□□□□ 0.24
PTPN11-207ENST00000639857 ZNF766Q5HY98 468 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms