RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 PDP1Q9P0J1 537 aaPredicted RBP14.39□□□□□ -0.11
TRIM3-215ENST00000639856 USP36Q9P275 1121 aaKnown RBP14.39□□□□□ -0.11
TRIM3-215ENST00000639856 CYP8B1Q9UNU6 501 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 SNRNP200O75643 2136 aaKnown RBP14.39□□□□□ -0.11
TRIM3-215ENST00000639856 KNL1Q8NG31 2342 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 PLXND1Q9Y4D7 1925 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 A0A1W2PPC1 479 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 TMEM229AB2RXF0 380 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 H3BMQ9 156 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 SLC1A7O00341 560 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 EML2O95834 649 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 IL3P08700 152 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 CDK4P11802 303 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 AGXTP21549 392 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 AK4P27144 223 aaPredicted RBP14.39□□□□□ -0.11
TRIM3-215ENST00000639856 SELENOWP63302 87 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 RBBP4Q09028 425 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 SFSWAPQ12872 951 aaKnown RBP14.39□□□□□ -0.11
TRIM3-215ENST00000639856 FADDQ13158 208 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 PTCRAQ6ISU1 281 aaPredicted RBP14.39□□□□□ -0.11
TRIM3-215ENST00000639856 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.39□□□□□ -0.11
TRIM3-215ENST00000639856 FRMD1Q8N878 549 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 SETD9Q8NE22 299 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 CCL4L1Q8NHW4 92 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 SGCDQ92629 289 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 MSANTD3Q96H12 275 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 COG8Q96MW5 612 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 CDX2Q99626 313 aaPredicted RBP14.39□□□□□ -0.11
TRIM3-215ENST00000639856 RHBGQ9H310 441 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 PELI2Q9HAT8 420 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 AHSPQ9NZD4 102 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 TMEM9Q9P0T7 183 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 PADI2Q9Y2J8 665 aa14.39□□□□□ -0.11
TRIM3-215ENST00000639856 GOLGA4Q13439 2230 aaKnown RBP14.39□□□□□ -0.11
TRIM3-215ENST00000639856 ANKDD1BA6NHY2 528 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 JRKO75564 520 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 SEC14L2O76054 403 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 HTR1AP08908 422 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 CCDC159P0C7I6 412 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 TPP2P29144 1249 aaPredicted RBP14.38□□□□□ -0.11
TRIM3-215ENST00000639856 CDK5R2Q13319 367 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 TUBA3CQ13748 450 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 KEAP1Q14145 624 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 GAS6Q14393 721 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 UAP1L1Q3KQV9 507 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 ZNF687Q8N1G0 1237 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 CAMK1GQ96NX5 476 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 EPYCQ99645 322 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 AIF1LQ9BQI0 150 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 RIBC2Q9H4K1 309 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 TMEM38AQ9H6F2 299 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 WASH6PQ9NQA3 447 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 MIEF1Q9NQG6 463 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 C1GALT1Q9NS00 363 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 THUMPD1Q9NXG2 353 aaKnown RBP14.38□□□□□ -0.11
TRIM3-215ENST00000639856 TBC1D29Q9UFV1 150 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 A0A1W2PRB8 838 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 PLPP1O14494 284 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 SEMA3DO95025 777 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 ATE1O95260 518 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 TBX6O95947 436 aaPredicted RBP14.38□□□□□ -0.11
TRIM3-215ENST00000639856 C9P02748 559 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 IGHV4-34P06331 123 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 HOXC4P09017 264 aaPredicted RBP14.38□□□□□ -0.11
TRIM3-215ENST00000639856 CXCR2P25025 360 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 RXRGP48443 463 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 CASP9P55211 416 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 IL5RAQ01344 420 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 IL1RL1Q01638 556 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 PRSS53Q2L4Q9 553 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 GCNT6Q5T4J0 391 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 DEPDC1Q5TB30 811 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 TRIM40Q6P9F5 258 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 ABHD11Q8NFV4 315 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 JPH3Q8WXH2 748 aaPredicted RBP14.38□□□□□ -0.11
TRIM3-215ENST00000639856 SMPDL3AQ92484 453 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 ZNF566Q969W8 418 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 MAGED4Q96JG8 741 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 WDR92Q96MX6 357 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 SORBS1Q9BX66 1292 aaKnown RBP14.38□□□□□ -0.11
TRIM3-215ENST00000639856 SLC6A16Q9GZN6 736 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 PCBD2Q9H0N5 130 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 POLMQ9NP87 494 aaPredicted RBP14.38□□□□□ -0.11
TRIM3-215ENST00000639856 EXD2Q9NVH0 621 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 SPATA7Q9P0W8 599 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 HSPE1-MOB4S4R3N1 261 aa14.38□□□□□ -0.11
TRIM3-215ENST00000639856 FANCMQ8IYD8 2048 aa14.37□□□□□ -0.11
TRIM3-215ENST00000639856 LRP4O75096 1905 aa14.37□□□□□ -0.11
TRIM3-215ENST00000639856 A0A1B0GVG6 124 aa14.37□□□□□ -0.11
TRIM3-215ENST00000639856 TRIM64BA6NI03 449 aa14.37□□□□□ -0.11
TRIM3-215ENST00000639856 MATN1P21941 496 aa14.37□□□□□ -0.11
TRIM3-215ENST00000639856 CLK3P49761 638 aaKnown RBP14.37□□□□□ -0.11
TRIM3-215ENST00000639856 DGKEP52429 567 aa14.37□□□□□ -0.11
TRIM3-215ENST00000639856 SIM2Q14190 667 aaPredicted RBP14.37□□□□□ -0.11
TRIM3-215ENST00000639856 ELOAQ14241 798 aaKnown RBP14.37□□□□□ -0.11
TRIM3-215ENST00000639856 RPE65Q16518 533 aa14.37□□□□□ -0.11
TRIM3-215ENST00000639856 SLC5A12Q1EHB4 618 aa14.37□□□□□ -0.11
TRIM3-215ENST00000639856 KHDRBS2Q5VWX1 349 aaKnown RBP14.37□□□□□ -0.11
TRIM3-215ENST00000639856 FAHD1Q6P587 224 aa14.37□□□□□ -0.11
TRIM3-215ENST00000639856 DHRS4L2Q6PKH6 230 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms