RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 ZNF599Q96NL3 588 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 ADAM7Q9H2U9 754 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 NT5DC2Q9H857 520 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 SLC22A11Q9NSA0 550 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 HIF1ANQ9NWT6 349 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 PURGQ9UJV8 347 aaKnown RBP4.15□□□□□ -1.74
SCN3A-209ENST00000639244 U3KQV3 271 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 ABCC5O15440 1437 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 SLC28A1O00337 649 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 LATS1O95835 1130 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 SCGB1D1O95968 90 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF14P17017 642 aaPredicted RBP4.15□□□□□ -1.75
SCN3A-209ENST00000639244 MAS1LP35410 378 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 PTGER3P43115 390 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 CSNK2A1P68400 391 aaPredicted RBP4.15□□□□□ -1.75
SCN3A-209ENST00000639244 TFAMQ00059 246 aaKnown RBP4.15□□□□□ -1.75
SCN3A-209ENST00000639244 PTH1RQ03431 593 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 CACNG1Q06432 222 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 GABPAQ06546 454 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 CARTPTQ16568 116 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 SLC35D3Q5M8T2 416 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF836Q6ZNA1 936 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 OVCH2Q7RTZ1 564 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 PID1Q7Z2X4 250 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 ADAT2Q7Z6V5 191 aaKnown RBP4.15□□□□□ -1.75
SCN3A-209ENST00000639244 NRROSQ86YC3 692 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 ZFPM1Q8IX07 1006 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 TC2NQ8N9U0 490 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 CSNK2A3Q8NEV1 391 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 SLC39A7Q92504 469 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 TAAR8Q969N4 342 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 ULK4Q96C45 1275 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 RBM15Q96T37 977 aaKnown RBP eCLIP4.15□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF426Q9BUY5 554 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 RAB34Q9BZG1 259 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 NXF2Q9GZY0 626 aaKnown RBP4.15□□□□□ -1.75
SCN3A-209ENST00000639244 C14orf93Q9H972 538 aaKnown RBP4.15□□□□□ -1.75
SCN3A-209ENST00000639244 PDGFCQ9NRA1 345 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 TREX1Q9NSU2 369 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 TMEM131LA2VDJ0 1609 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 CNTNAP1P78357 1384 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 TRBV23-1A0A0A0MS06 115 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 FBLL1A6NHQ2 334 aaKnown RBP4.15□□□□□ -1.75
SCN3A-209ENST00000639244 M0R143 59 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF208O43345 1280 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 TM7SF2O76062 418 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 CBX6O95503 412 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 RAF1P04049 648 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 YBX3P16989 372 aaKnown RBP eCLIP4.15□□□□□ -1.75
SCN3A-209ENST00000639244 ACOT2P49753 483 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 SEMA5AQ13591 1074 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 DPCR1Q3MIW9 517 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 DNLZQ5SXM8 178 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 GDPD4Q6W3E5 623 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 LINC00696Q6ZRV3 163 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 MOGAT3Q86VF5 341 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 ADGRG2Q8IZP9 1017 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 FBXO39Q8N4B4 442 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 OR56A3Q8NH54 315 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 HGDQ93099 445 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 DCPSQ96C86 337 aaKnown RBP4.15□□□□□ -1.75
SCN3A-209ENST00000639244 GDF3Q9NR23 364 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 PGPEP1Q9NXJ5 209 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 SCP2D1Q9UJQ7 156 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 ADAMTS5Q9UNA0 930 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 PKP3Q9Y446 797 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 LRRC7Q96NW7 1537 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 MGAT4DA6NG13 374 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 INHBBP09529 407 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 METTL15P1P0C7V9 234 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 RD3LP0DJH9 198 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 ARNTP27540 789 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 CASP1P29466 404 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 FMO4P31512 558 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF239Q16600 458 aaKnown RBP4.15□□□□□ -1.75
SCN3A-209ENST00000639244 CELF3Q5SZQ8 465 aaKnown RBP4.15□□□□□ -1.75
SCN3A-209ENST00000639244 LPCAT4Q643R3 524 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 KCTD9Q7L273 389 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 TMEM139Q8IV31 216 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 ZNF34Q8IZ26 560 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 LGR4Q9BXB1 951 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 STOX2Q9P2F5 926 aaPredicted RBP4.15□□□□□ -1.75
SCN3A-209ENST00000639244 KIF25Q9UIL4 384 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 PCDHGA7Q9Y5G6 932 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 LAMC3Q9Y6N6 1575 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 TUBGCP6Q96RT7 1819 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 NPHP4O75161 1426 aaPredicted RBP4.15□□□□□ -1.75
SCN3A-209ENST00000639244 IFT172Q9UG01 1749 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 FAM230AA0A1W2PPH8 454 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 SIGLEC5O15389 551 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 LRIG2O94898 1065 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 CD48P09326 243 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 TSPAN19P0C672 248 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 BMP6P22004 513 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 UBA1P22314 1058 aaKnown RBP4.15□□□□□ -1.75
SCN3A-209ENST00000639244 OAZ1P54368 228 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 CSHL1Q14406 222 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 MFSD10Q14728 455 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 TEDDM1Q5T9Z0 273 aa4.15□□□□□ -1.75
SCN3A-209ENST00000639244 SFRP1Q8N474 314 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms