RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 PRSS38A1L453 326 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 RBMS1P29558 406 aaKnown RBP13.05□□□□□ -0.32
SCARB2-215ENST00000639145 PRDX3P30048 256 aaKnown RBP13.05□□□□□ -0.32
SCARB2-215ENST00000639145 OTX2P32243 289 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 GNALP38405 381 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 KRR1Q13601 381 aaKnown RBP13.05□□□□□ -0.32
SCARB2-215ENST00000639145 P4HA3Q7Z4N8 544 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 OR52E1Q8NGJ3 308 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 TSEN15Q8WW01 171 aaKnown RBP13.05□□□□□ -0.32
SCARB2-215ENST00000639145 EZH1Q92800 747 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-215ENST00000639145 NXPE3Q969Y0 559 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 MYADMQ96S97 322 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 GAL3ST1Q99999 423 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 COMMD3-BMI1R4GMX3 469 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 TTC3P53804 2025 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 CPNE3O75131 537 aaKnown RBP13.05□□□□□ -0.32
SCARB2-215ENST00000639145 GABBR2O75899 941 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 NADKO95544 446 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-215ENST00000639145 C1SP09871 688 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 RPS15P62841 145 aaKnown RBP13.05□□□□□ -0.32
SCARB2-215ENST00000639145 CAMK1Q14012 370 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 DAG1Q14118 895 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 FIGNL1Q6PIW4 674 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 SDR16C5Q8N3Y7 309 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 GPR150Q8NGU9 434 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.05□□□□□ -0.325e-8■■■■□ 23.5
SCARB2-215ENST00000639145 APIPQ96GX9 242 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 NODALQ96S42 347 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 COQ7Q99807 217 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 KCNK12Q9HB15 430 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 AIG1Q9NVV5 245 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 ACTR10Q9NZ32 417 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 PRODH2Q9UF12 536 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 BCAT2O15382 392 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-215ENST00000639145 GP1BBP13224 206 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 CSNK1DP48730 415 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.04□□□□□ -0.32
SCARB2-215ENST00000639145 GALNT7Q86SF2 657 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 PDZD3Q86UT5 571 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 CLECL1Q8IZS7 167 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 DPH2Q9BQC3 489 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-215ENST00000639145 CHCHD6Q9BRQ6 235 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 PTGES2Q9H7Z7 377 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 PREBQ9HCU5 417 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 HMG20AQ9NP66 347 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 EIF3FO00303 357 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-215ENST00000639145 AHSA1O95433 338 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 EGFP01133 1207 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 DCNP07585 359 aaKnown RBP13.04□□□□□ -0.32
SCARB2-215ENST00000639145 PSMA1P25786 263 aaKnown RBP13.04□□□□□ -0.32
SCARB2-215ENST00000639145 CAPGP40121 348 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 PER3P56645 1201 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 ST3GAL3Q11203 375 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 CCNIQ14094 377 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 MRPL58Q14197 206 aaKnown RBP13.04□□□□□ -0.32
SCARB2-215ENST00000639145 MZT2AQ6P582 158 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 HSDL2Q6YN16 418 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 USP30Q70CQ3 517 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 C6orf120Q7Z4R8 191 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 KRT77Q7Z794 578 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 RIT1Q92963 219 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 TMEM168Q9H0V1 697 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 TBC1D17Q9HA65 648 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 PLEKHA1Q9HB21 404 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 MKS1Q9NXB0 559 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 SLC9B1P1A6NJY1 282 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 G3V2L1 256 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 MAGEA6P43360 314 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 OMPP47874 163 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 ITGADQ13349 1161 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 LRP8Q14114 963 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 OR4C11Q6IEV9 310 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 NANOGNBQ7Z5D8 188 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 LRRC25Q8N386 305 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-215ENST00000639145 MRPS26Q9BYN8 205 aaKnown RBP13.04□□□□□ -0.32
SCARB2-215ENST00000639145 BCL2L14Q9BZR8 327 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 TRIM2Q9C040 744 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 ABCB10Q9NRK6 738 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 MARK1Q9P0L2 795 aa13.04□□□□□ -0.32
SCARB2-215ENST00000639145 FAM92AA1XBS5 289 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 POLR1CO15160 346 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-215ENST00000639145 CSTAP01040 98 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 LAMP1P11279 417 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 DNAJA1P31689 397 aaKnown RBP13.03□□□□□ -0.32
SCARB2-215ENST00000639145 NUDT6P53370 316 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 MANEALQ5VSG8 457 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 OR52E8Q6IFG1 317 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 TRAF7Q6Q0C0 670 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 ZNF534Q76KX8 674 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 UBASH3BQ8TF42 649 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 PYURFQ96I23 114 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 LPAR4Q99677 370 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 COPS4Q9BT78 406 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 PHF7Q9BWX1 381 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-215ENST00000639145 CPNE7Q9UBL6 633 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 RP1P56715 2156 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 A0A0A6YYC8 382 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-215ENST00000639145 IRGMA1A4Y4 181 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 I3L1I5 382 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-215ENST00000639145 LINC01565O15544 149 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms