RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 ZNF286BP0CG31 522 aa14.6□□□□□ -0.07
UBE3A-227ENST00000638011 CEACAM20Q6UY09 585 aa14.6□□□□□ -0.07
UBE3A-227ENST00000638011 HOXB13Q92826 284 aaPredicted RBP14.6□□□□□ -0.07
UBE3A-227ENST00000638011 HSH2DQ96JZ2 352 aa14.6□□□□□ -0.07
UBE3A-227ENST00000638011 ZNF286AQ9HBT8 521 aa14.6□□□□□ -0.07
UBE3A-227ENST00000638011 SRA1Q9HD15 236 aaKnown RBP14.6□□□□□ -0.07
UBE3A-227ENST00000638011 FAM212BQ9NTI7 297 aaPredicted RBP14.6□□□□□ -0.07
UBE3A-227ENST00000638011 HBE1P02100 147 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 IQCF1Q8N6M8 205 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 OR8S1Q8NH09 359 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 LNX1Q8TBB1 728 aaPredicted RBP14.59□□□□□ -0.07
UBE3A-227ENST00000638011 NSMAFQ92636 917 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 PSD2Q9BQI7 771 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 ABHD16BQ9H3Z7 469 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 A0A1W2PRB8 838 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 KIAA0513O60268 411 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 AMHP03971 560 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 TCEA1P23193 301 aaKnown RBP14.59□□□□□ -0.07
UBE3A-227ENST00000638011 PDE12Q6L8Q7 609 aaKnown RBP14.59□□□□□ -0.07
UBE3A-227ENST00000638011 KCNMB3Q9NPA1 279 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 ARPC5O15511 151 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 DLX5P56178 289 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 GRIK2Q13002 908 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 GPR33Q49SQ1 333 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 ATG9BQ674R7 924 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 GLYATL1Q969I3 302 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 TSSK6Q9BXA6 273 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 SLC25A31Q9H0C2 315 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 B4GALT4O60513 344 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 CSNK2A2P19784 350 aaPredicted RBP14.59□□□□□ -0.07
UBE3A-227ENST00000638011 MADCAM1Q13477 382 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 C4orf17Q53FE4 359 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 C6orf141Q5SZD1 244 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 ZFP82Q8N141 532 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 KCT2Q8NC54 265 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 MINDY3Q9H8M7 445 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 BPIFA1Q9NP55 256 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 TIMM22Q9Y584 194 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 PCDHGA2Q9Y5H1 932 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 RETP07949 1114 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 LILRB2Q8N423 598 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 GNPDA2Q8TDQ7 276 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 NIPSNAP3BQ9BS92 247 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 AKAP11Q9UKA4 1901 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 CCL15-CCL14A0A0B4J2E2 113 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 TRBC2A0A5B9 178 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 OR1F1O43749 312 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 FADS1O60427 444 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 PSMD10O75832 226 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 ENGP17813 658 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 CD9P21926 228 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 ELOAQ14241 798 aaKnown RBP14.59□□□□□ -0.07
UBE3A-227ENST00000638011 CCL15Q16663 113 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 FAM156AQ8NDB6 213 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 PMM1Q92871 262 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 MAL2Q969L2 176 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 ATG4CQ96DT6 458 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 SMCO4Q9NRQ5 59 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 TEX10Q9NXF1 929 aaPredicted RBP14.59□□□□□ -0.07
UBE3A-227ENST00000638011 RHOP08100 348 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 IL1R1P14778 569 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 RPS5P46782 204 aaKnown RBP14.59□□□□□ -0.07
UBE3A-227ENST00000638011 ZNF33AQ06730 810 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 CYBRD1Q53TN4 286 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 AVPI1Q5T686 147 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 GPR157Q5UAW9 335 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 PIGZQ86VD9 579 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 OR2M2Q96R28 347 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 ELP3Q9H9T3 547 aa14.59□□□□□ -0.07
UBE3A-227ENST00000638011 BPIP17213 487 aa14.58□□□□□ -0.07
UBE3A-227ENST00000638011 PRKAR1BP31321 381 aa14.58□□□□□ -0.07
UBE3A-227ENST00000638011 PSPHP78330 225 aa14.58□□□□□ -0.07
UBE3A-227ENST00000638011 MFSD13AQ14CX5 517 aa14.58□□□□□ -0.07
UBE3A-227ENST00000638011 METAP1DQ6UB28 335 aaPredicted RBP14.58□□□□□ -0.07
UBE3A-227ENST00000638011 RAB39BQ96DA2 213 aa14.58□□□□□ -0.07
UBE3A-227ENST00000638011 HAPLN3Q96S86 360 aa14.58□□□□□ -0.07
UBE3A-227ENST00000638011 NELL2Q99435 816 aa14.58□□□□□ -0.07
UBE3A-227ENST00000638011 AKTIPQ9H8T0 292 aa14.58□□□□□ -0.07
UBE3A-227ENST00000638011 TMPRSS4Q9NRS4 437 aa14.58□□□□□ -0.07
UBE3A-227ENST00000638011 MDC1Q14676 2089 aaKnown RBP14.58□□□□□ -0.07
UBE3A-227ENST00000638011 DFFBO76075 338 aa14.58□□□□□ -0.08
UBE3A-227ENST00000638011 PKLRP30613 574 aa14.58□□□□□ -0.08
UBE3A-227ENST00000638011 ETV5P41161 510 aa14.58□□□□□ -0.08
UBE3A-227ENST00000638011 EMX2Q04743 252 aa14.58□□□□□ -0.08
UBE3A-227ENST00000638011 MLIPQ5VWP3 458 aa14.58□□□□□ -0.08
UBE3A-227ENST00000638011 SLC39A4Q6P5W5 647 aa14.58□□□□□ -0.08
UBE3A-227ENST00000638011 SNX27Q96L92 541 aa14.58□□□□□ -0.08
UBE3A-227ENST00000638011 OR52A5Q9H2C5 316 aa14.58□□□□□ -0.08
UBE3A-227ENST00000638011 CCM2LQ9NUG4 571 aaPredicted RBP14.58□□□□□ -0.08
UBE3A-227ENST00000638011 RAI2Q9Y5P3 530 aa14.58□□□□□ -0.08
UBE3A-227ENST00000638011 RNF215Q9Y6U7 377 aa14.58□□□□□ -0.08
UBE3A-227ENST00000638011 CLN5O75503 358 aa14.58□□□□□ -0.08
UBE3A-227ENST00000638011 HLA-HP01893 362 aa14.58□□□□□ -0.08
UBE3A-227ENST00000638011 CASRP41180 1078 aa14.58□□□□□ -0.08
UBE3A-227ENST00000638011 DYRK1AQ13627 763 aa14.58□□□□□ -0.08
UBE3A-227ENST00000638011 GLYATL2Q8WU03 294 aa14.58□□□□□ -0.08
UBE3A-227ENST00000638011 AMBNQ9NP70 447 aa14.58□□□□□ -0.08
UBE3A-227ENST00000638011 TXNL1O43396 289 aa14.58□□□□□ -0.08
UBE3A-227ENST00000638011 DCNP07585 359 aaKnown RBP14.58□□□□□ -0.08
UBE3A-227ENST00000638011 CTNNB1P35222 781 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms