RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 STK17BO94768 372 aa17.19■□□□□ 0.34
CACNA1A-227ENST00000636549 AMY2BP19961 511 aa17.19■□□□□ 0.34
CACNA1A-227ENST00000636549 CDKN2BP42772 138 aa17.19■□□□□ 0.34
CACNA1A-227ENST00000636549 OR4F6Q8NGB9 312 aa17.19■□□□□ 0.34
CACNA1A-227ENST00000636549 CCDC107Q8WV48 283 aa17.19■□□□□ 0.34
CACNA1A-227ENST00000636549 OR5B2Q96R09 309 aa17.19■□□□□ 0.34
CACNA1A-227ENST00000636549 SLAMF7Q9NQ25 335 aa17.19■□□□□ 0.34
CACNA1A-227ENST00000636549 ZNF175Q9Y473 711 aa17.19■□□□□ 0.34
CACNA1A-227ENST00000636549 A0A0G2JLL6 359 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 CD8B2A6NJW9 211 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 CSTAP01040 98 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 CD8BP10966 210 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 PTGER1P34995 402 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 E2F1Q01094 437 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 PON3Q15166 354 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 ADGRF1Q5T601 910 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 PRRT2Q7Z6L0 340 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 MEX3DQ86XN8 651 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 ALDH16A1Q8IZ83 802 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 SLC44A3Q8N4M1 653 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 FLRT1Q9NZU1 646 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 GALPQ9UBC7 116 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 MGAT4BQ9UQ53 548 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 KCNIP3Q9Y2W7 256 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 KIF20BQ96Q89 1820 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 A0A0G2JPF8 293 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 HNRNPCL3B7ZW38 293 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 CLDN25C9JDP6 229 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 BCAS1O75363 584 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 HNRNPCL4P0DMR1 293 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 NAA20P61599 178 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 IER5LQ5T953 404 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 MFSD8Q8NHS3 518 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 HNRNPABQ99729 332 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 POU2F2P09086 479 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 PRKAR1BP31321 381 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 SOX3P41225 446 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 ASPAP45381 313 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 CLEC17AQ6ZS10 378 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 ALG3Q92685 438 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 LMAN1LQ9HAT1 526 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 KCNK12Q9HB15 430 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 GCM1Q9NP62 436 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 CLEC4EQ9ULY5 219 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 A0A1W2PPW3 197 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 METTL21EPA6NDL7 271 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 MPZL2O60487 215 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 CD3GP09693 182 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 PNLIPRP1P54315 467 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 YBEYP58557 167 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 GNG13Q9P2W3 67 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 LATS1O95835 1130 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 ESR1P03372 595 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 TUBB3Q13509 450 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 FGL2Q14314 439 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 KIAA0895LQ68EN5 471 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 USP43Q70EL4 1123 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 GALNT15Q8N3T1 639 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 SCAMP4Q969E2 229 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 ARHGAP39Q9C0H5 1083 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 CDH20Q9HBT6 801 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 APOBEC3GQ9HC16 384 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 POT1Q9NUX5 634 aa17.18■□□□□ 0.34
CACNA1A-227ENST00000636549 TP53I11O14683 189 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 AQP4P55087 323 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 CDONQ4KMG0 1287 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 OR4C15Q8NGM1 316 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 C3orf49Q96BT1 292 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 DGCR14Q96DF8 476 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 NEDD4LQ96PU5 975 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 SLC6A16Q9GZN6 736 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 CWH43Q9H720 699 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 TPT1P8Q9HAU6 139 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 POLE4Q9NR33 117 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 PRPF19Q9UMS4 504 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 LOC102723532A0A0G2JNH3 316 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 C2orf72A6NCS6 295 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 H0Y8G0 127 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 ORC5O43913 435 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 MSR1P21757 451 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 TAS2R39P59534 338 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 CDKN3Q16667 212 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 ZNF347Q96SE7 839 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 HERPUD2Q9BSE4 406 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 B8ZZF3 427 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 SULT1B1O43704 296 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 RPS17P08708 135 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 TGM1P22735 817 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 ARL2P36404 184 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 RPS21P63220 83 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 DMWDQ09019 674 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 TRIM61Q5EBN2 209 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 C22orf39Q6P5X5 142 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 VSX1Q9NZR4 365 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 C2orf78A6NCI8 922 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 TRMUO75648 421 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 PGGT1BP53609 377 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 FGL1Q08830 312 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 RPA4Q13156 261 aa17.17■□□□□ 0.34
CACNA1A-227ENST00000636549 ABHD17BQ5VST6 288 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms