RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 SENP8Q96LD8 212 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 SNX18Q96RF0 628 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 SLC6A7Q99884 636 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 HERC2P3Q9BVR0 1158 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 POLR2J2Q9GZM3 115 aaKnown RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 TMLHEQ9NVH6 421 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 ARMC1Q9NVT9 282 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 TEX10Q9NXF1 929 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 ZFR2Q9UPR6 939 aaKnown RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 HCN4Q9Y3Q4 1203 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 IMPA2O14732 288 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 EPHB6O15197 1021 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 RECQL4O94761 1208 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 SCELO95171 688 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 HBQ1P09105 142 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 MAKP20794 623 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 CD79BP40259 229 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 PDLIM3Q53GG5 364 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 C6orf89Q6UWU4 347 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 DIO2Q92813 273 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 CYP2S1Q96SQ9 504 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 SECISBP2Q96T21 854 aaKnown RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 MFFQ9GZY8 342 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 RNPEPL1Q9HAU8 725 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 MS4A12Q9NXJ0 267 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 TAS2R9Q9NYW1 312 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 U3KQV3 271 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 ALPK2Q86TB3 2170 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 SMAD9O15198 467 aaKnown RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 SIAH2O43255 324 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 TLR5O60602 858 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 FSBPO95073 299 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 PAHP00439 452 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 TBPP20226 339 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 FNTBP49356 437 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 PRMT2P55345 433 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 FOLH1Q04609 750 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 GPRC6AQ5T6X5 926 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 ARHGAP11AQ6P4F7 1023 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 CNKSR3Q6P9H4 555 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 MON1AQ86VX9 555 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 TICAM1Q8IUC6 712 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 MB21D2Q8IYB1 491 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 KIAA0895Q8NCT3 520 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 PECRQ9BY49 303 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 TSPAN10Q9H1Z9 355 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 CD320Q9NPF0 282 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 TAS2R14Q9NYV8 317 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 PCDHAC2Q9Y5I4 1007 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 SNX10Q9Y5X0 201 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 NRP2O60462 931 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 TGM1P22735 817 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 ADORA2AP29274 412 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 DGKGP49619 791 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 MLLT1Q03111 559 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 C10orf62Q5T681 223 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 UBE2UQ5VVX9 321 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 RTL6Q6ICC9 239 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 CRELD2Q6UXH1 353 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 GSG1LQ6UXU4 331 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 MCATQ8IVS2 390 aaKnown RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 GPR137CQ8N3F9 429 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 NXPE3Q969Y0 559 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 TTYH2Q9BSA4 534 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 CCM2Q9BSQ5 444 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 BCO2Q9BYV7 579 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 POLD4Q9HCU8 107 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 BPIFA1Q9NP55 256 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 CCM2LQ9NUG4 571 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 SARDHQ9UL12 918 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 VSTM2BA6NLU5 285 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 LRRC30A6NM36 301 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 VIPR1P32241 457 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 CDKN1CP49918 316 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 BIDP55957 195 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 OR2B6P58173 313 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 RPL23AP62750 156 aaKnown RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 MXD1Q05195 221 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 NOGQ13253 232 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 LASP1Q14847 261 aaKnown RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 BCL2L15Q5TBC7 163 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 TMEM53Q6P2H8 277 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 MBOAT1Q6ZNC8 495 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 SIMC1Q8NDZ2 872 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 CPEB3Q8NE35 698 aaKnown RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 FAM46DQ8NEK8 389 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 PIWIL1Q96J94 861 aaKnown RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 BMFQ96LC9 184 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 HSFY1Q96LI6 401 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 XPNPEP1Q9NQW7 623 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 MGAT4BQ9UQ53 548 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 A2ML1A8K2U0 1454 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 H0YIV9 168 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 YY2O15391 372 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 GATCO43716 136 aaKnown RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 TRAF3IP2O43734 574 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 LYPLA1O75608 230 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 B3GALNT1O75752 331 aa5.82□□□□□ -1.48
SCN1A-212ENST00000636194 FRKP42685 505 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-212ENST00000636194 PTTG1IPP53801 180 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms