RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 SLC7A6OSQ96CW6 309 aaPredicted RBP9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 LRRC58Q96CX6 371 aa9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 ZNF285Q96NJ3 590 aa9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 BBS4Q96RK4 519 aa9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 CMKLR1Q99788 373 aa9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 ECSITQ9BQ95 431 aa9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 PELOQ9BRX2 385 aaKnown RBP9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 THTPAQ9BU02 230 aa9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 SPATA9Q9BWV2 254 aa9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 KLHL25Q9H0H3 589 aa9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 RASSF4Q9H2L5 321 aa9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 FSCN3Q9NQT6 498 aa9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 PRDM7Q9NQW5 492 aa9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 THUMPD1Q9NXG2 353 aaKnown RBP9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 MAN2B2Q9Y2E5 1009 aa9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 KLHL20Q9Y2M5 609 aa9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 PCDHA9Q9Y5H5 950 aa9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 EYSQ5T1H1 3165 aa9.63□□□□□ -0.87
FOXCUT-201ENST00000628509 ADAMTS9Q9P2N4 1935 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 MDC1Q14676 2089 aaKnown RBP9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 A0A1W2PRB8 838 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 TMEM150CB9EJG8 249 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 D6RAR5 112 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 SH3BP5O60239 455 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 GALR3O60755 368 aaPredicted RBP9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 RFPL3O75679 317 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 LRATO95237 230 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 SMIM10L1P0DMW3 83 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 CSNK2A2P19784 350 aaPredicted RBP9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 CAPN3P20807 821 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 ME2P23368 584 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 GPC1P35052 558 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 SEPHS1P49903 392 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 MANFP55145 182 aaKnown RBP9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 RAB38P57729 211 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 CORO7P57737 925 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 YBX1P67809 324 aaKnown RBP9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 TNFRSF17Q02223 184 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 SPEM2Q0P670 501 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 EIF3IQ13347 325 aaKnown RBP9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 MLC1Q15049 377 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 PRTGQ2VWP7 1150 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 DEFB134Q4QY38 66 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 PHF19Q5T6S3 580 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 MRM1Q6IN84 353 aaKnown RBP9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 FRMPD2BQ6IN97 320 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 ADNP2Q6IQ32 1131 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 RBM44Q6ZP01 1051 aaKnown RBP9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 PRR23CQ6ZRP0 262 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 RINLQ6ZS11 566 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 PPP1R3BQ86XI6 285 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 KIAA2013Q8IYS2 634 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 RNF175Q8N4F7 328 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 KCT2Q8NC54 265 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 CLHC1Q8NHS4 586 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 ZCCHC10Q8TBK6 192 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 OR5P2Q8WZ92 322 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 JADE3Q92613 823 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 STMN2Q93045 179 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 TM4SF18Q96CE8 201 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 PRR11Q96HE9 360 aaPredicted RBP9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 SMIM10Q96HG1 83 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 LRGUKQ96M69 825 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 CCDC115Q96NT0 180 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 NPAS2Q99743 824 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 ZPBPQ9BS86 351 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 C3orf14Q9HBI5 128 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 FGF21Q9NSA1 209 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 UTS2RQ9UKP6 389 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 DAPP1Q9UN19 280 aa9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 RRP15Q9Y3B9 282 aaKnown RBP9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.62□□□□□ -0.87
FOXCUT-201ENST00000628509 LOC105369274A0A096LPK9 316 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 LOC102723532A0A0G2JNH3 316 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 GABRR3A8MPY1 467 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 A8MU76 341 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 NTN3O00634 580 aaPredicted RBP9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 PROM1O43490 865 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 KLHL18O94889 574 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 IFI6P09912 130 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 ITGAXP20702 1163 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 TACR1P25103 407 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 CCKBRP32239 447 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 LSSP48449 732 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 EEFSECP57772 596 aaKnown RBP9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 RAB15P59190 212 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 FOXK1P85037 733 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 PRR5P85299 388 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 SLC25A3Q00325 362 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 VAC14Q08AM6 782 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 HYAL2Q12891 473 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 TP53BP2Q13625 1128 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 SERTAD2Q14140 314 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 GNA13Q14344 377 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 TLR1Q15399 786 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 CCDC6Q16204 474 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 UGT8Q16880 541 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 PERM1Q5SV97 790 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms