RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 PHF11Q9UIL8 331 aa11.77□□□□□ -0.53
LINC00963-216ENST00000623185 SPACA6W5XKT8 324 aa11.77□□□□□ -0.53
LINC00963-216ENST00000623185 ADAMTS20P59510 1910 aa11.77□□□□□ -0.53
LINC00963-216ENST00000623185 SPTBP11277 2137 aa11.77□□□□□ -0.53
LINC00963-216ENST00000623185 LOC101059948A0A1B0GTJ6 334 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 GMNCA6NCL1 334 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 PSMD12O00232 456 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-216ENST00000623185 CLDN4O14493 209 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 SDHDO14521 159 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 POLR3GO15318 223 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-216ENST00000623185 TLX3O43711 291 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-216ENST00000623185 TMPRSS11DO60235 418 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 ANXA4P09525 319 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-216ENST00000623185 PRPS2P11908 318 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 LBPP18428 481 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 JAK1P23458 1154 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 CERS1P27544 350 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 MAPK1P28482 360 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 PTPN4P29074 926 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 TIA1P31483 386 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC00963-216ENST00000623185 DLSTP36957 453 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 XCR1P46094 333 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 MAPK12P53778 367 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 GYS2P54840 703 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 MAT1AQ00266 395 aaKnown RBP11.76□□□□□ -0.53
LINC00963-216ENST00000623185 CLN3Q13286 438 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 BIKQ13323 160 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 SSPNQ14714 243 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 NCF4Q15080 339 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 TGIF1Q15583 401 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 SYT16Q17RD7 645 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 VWA2Q5GFL6 755 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 OGFOD2Q6N063 350 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 FAM198BQ6UWH4 519 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 SPATA19Q7Z5L4 167 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 ZNF595Q8IYB9 648 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 PLPP5Q8NEB5 264 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 CT55Q8WUE5 264 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 TANKQ92844 425 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 KIAA1143Q96AT1 154 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-216ENST00000623185 MIEF2Q96C03 454 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 RNF31Q96EP0 1072 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 PEX11GQ96HA9 241 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 MAPKAP1Q9BPZ7 522 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 TRIM55Q9BYV6 548 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 ASIC5Q9NY37 505 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 CROTQ9UKG9 612 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 TCFL5Q9UL49 500 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 MRPS33Q9Y291 106 aaKnown RBP11.76□□□□□ -0.53
LINC00963-216ENST00000623185 PADI2Q9Y2J8 665 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 ATG4BQ9Y4P1 393 aa11.76□□□□□ -0.53
LINC00963-216ENST00000623185 GNG14A0A1W2PPG7 69 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 A0A1W2PR48 441 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 TMEM8BA6NDV4 472 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 ZNF860A6NHJ4 632 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 PCDH17O14917 1159 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 PCDH7O60245 1069 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 CTNSO60931 367 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 GBAP04062 536 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 FHP07954 510 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 TROVE2P10155 538 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC00963-216ENST00000623185 DRD2P14416 443 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 CPN2P22792 545 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 EPHA3P29320 983 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 LSP1P33241 339 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 EIF2S3P41091 472 aaKnown RBP11.75□□□□□ -0.53
LINC00963-216ENST00000623185 BUD31P41223 144 aaPredicted RBP11.75□□□□□ -0.53
LINC00963-216ENST00000623185 IDH3AP50213 366 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 AQP5P55064 265 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 HSD17B7P56937 341 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 ERVK-8P63133 956 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 OLR1P78380 273 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 DNASE1L3Q13609 305 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 COL9A2Q14055 689 aaPredicted RBP11.75□□□□□ -0.53
LINC00963-216ENST00000623185 HEPACAMQ14CZ8 416 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 GALNTL6Q49A17 601 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 VWA5B1Q5TIE3 1220 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 IL23RQ5VWK5 629 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 MAVSQ7Z434 540 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 LAPTM4BQ86VI4 370 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 FNDC5Q8NAU1 212 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 OR2Y1Q8NGV0 311 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 C16orf78Q8WTQ4 265 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 KCNE4Q8WWG9 221 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 SPSB2Q99619 263 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 CCDC28BQ9BUN5 200 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 FAIM2Q9BWQ8 316 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 WDR55Q9H6Y2 383 aaPredicted RBP11.75□□□□□ -0.53
LINC00963-216ENST00000623185 RPF2Q9H7B2 306 aaKnown RBP11.75□□□□□ -0.53
LINC00963-216ENST00000623185 GPN2Q9H9Y4 310 aaPredicted RBP11.75□□□□□ -0.53
LINC00963-216ENST00000623185 WDR41Q9HAD4 459 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 KCNK13Q9HB14 408 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 LANCL2Q9NS86 450 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 FGFR1OP2Q9NVK5 253 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 NOP53Q9NZM5 478 aaKnown RBP11.75□□□□□ -0.53
LINC00963-216ENST00000623185 HCN3Q9P1Z3 774 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 CTSFQ9UBX1 484 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 ADAM21Q9UKJ8 722 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 FBXW2Q9UKT8 454 aa11.75□□□□□ -0.53
LINC00963-216ENST00000623185 EIF3LQ9Y262 564 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms