RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 RAB8BQ92930 207 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 TMCO6Q96DC7 493 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 CDADC1Q9BWV3 514 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 DUSP15Q9H1R2 295 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-229ENST00000622668 ANKRD10Q9NXR5 420 aa8.68□□□□□ -1.02
HDAC9-229ENST00000622668 ZNF726A6NNF4 738 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 CHST10O43529 356 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 PDYNP01213 254 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 CDK4P11802 303 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 SLC25A3Q00325 362 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 TARDBPQ13148 414 aaKnown RBP eCLIP8.67□□□□□ -1.02
HDAC9-229ENST00000622668 FZD2Q14332 565 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 METRNLQ641Q3 311 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 GLB1L3Q8NCI6 653 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-229ENST00000622668 OR2L8Q8NGY9 312 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 RHEBL1Q8TAI7 183 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 MOCOSQ96EN8 888 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 VPS35Q96QK1 796 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 SEMA6CQ9H3T2 930 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 PDFQ9HBH1 243 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 MBD1Q9UIS9 605 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-229ENST00000622668 POLHQ9Y253 713 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 A0A1W2PQF6 199 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 ANTXRLA6NF34 631 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 UBOX5O94941 541 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 LDLRP01130 860 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 GIMD1P0DJR0 217 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 ITGA2P17301 1181 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 ITIH1P19827 911 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 FASP25445 335 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 ACADLP28330 430 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 TPP2P29144 1249 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-229ENST00000622668 ST13P50502 369 aaKnown RBP8.67□□□□□ -1.02
HDAC9-229ENST00000622668 NOXRED1Q6NXP6 359 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 PAPD4Q6PIY7 484 aaKnown RBP8.67□□□□□ -1.02
HDAC9-229ENST00000622668 ZNF534Q76KX8 674 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 PRR22Q8IZ63 422 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 COQ10AQ96MF6 247 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 FCRL4Q96PJ5 515 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 NEUROD4Q9HD90 331 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 KCMF1Q9P0J7 381 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 NOX1Q9Y5S8 564 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 C6orf47O95873 294 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 ALDOAP04075 364 aaKnown RBP8.67□□□□□ -1.02
HDAC9-229ENST00000622668 GP1BBP13224 206 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 ZNF28P17035 718 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 PSMA3P25788 255 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 TIA1P31483 386 aaKnown RBP eCLIP8.67□□□□□ -1.02
HDAC9-229ENST00000622668 RGS19P49795 217 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 VASPP50552 380 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-229ENST00000622668 RALGDSQ12967 914 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 EIF3IQ13347 325 aaKnown RBP8.67□□□□□ -1.02
HDAC9-229ENST00000622668 SIX1Q15475 284 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-229ENST00000622668 ZNF678Q5SXM1 525 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 TMEM71Q6P5X7 295 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 LCTLQ6UWM7 567 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 LARP4Q71RC2 724 aaKnown RBP eCLIP8.67□□□□□ -1.02
HDAC9-229ENST00000622668 ATCAYQ86WG3 371 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 OR2L3Q8NG85 312 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 OR56A1Q8NGH5 318 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 OR51Q1Q8NH59 317 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 ZFPM2Q8WW38 1151 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 GORASP1Q9BQQ3 440 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 UTP23Q9BRU9 249 aaKnown RBP8.67□□□□□ -1.02
HDAC9-229ENST00000622668 RASSF4Q9H2L5 321 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 AKTIPQ9H8T0 292 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 SPAG4Q9NPE6 437 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 SLC23A2Q9UGH3 650 aa8.67□□□□□ -1.02
HDAC9-229ENST00000622668 NXT1Q9UKK6 140 aaKnown RBP8.67□□□□□ -1.02
HDAC9-229ENST00000622668 CCDC163A0A0D9SF12 145 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 TRBV11-1A0A0K0K1C0 115 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 ST6GAL1P15907 406 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 BLVRAP53004 296 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 POU6F2P78424 691 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-229ENST00000622668 FLYWCH1Q4VC44 716 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 KLHL12Q53G59 568 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 TECRLQ5HYJ1 363 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 NDUFAF5Q5TEU4 345 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 ARMC3Q5W041 872 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 BHLHA9Q7RTU4 235 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 GALNT7Q86SF2 657 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 GPAT4Q86UL3 456 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-229ENST00000622668 SLC22A15Q8IZD6 547 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 NATD1Q8N6N6 113 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 OR10A6Q8NH74 314 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 LKAAEAR1Q8TD35 194 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 SFXN2Q96NB2 322 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 TRIB3Q96RU7 358 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 MKKSQ9NPJ1 570 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-229ENST00000622668 ERVK-19Q9WJR5 959 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 RPH3AQ9Y2J0 694 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-229ENST00000622668 INTS1Q8N201 2190 aaKnown RBP8.66□□□□□ -1.02
HDAC9-229ENST00000622668 RTTNQ86VV8 2226 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 A0A1B0GTQ1 180 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 E7ENX8 843 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 AGR2O95994 175 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 G6PDP11413 515 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 FCARP24071 287 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 MSX2P35548 267 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms