RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 TAS2R16Q9NYV7 291 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 CDH10Q9Y6N8 788 aa7.61□□□□□ -1.19
VPS11-209ENST00000622309 A0A1B0GVI7 797 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 NCF1BA6NI72 391 aaPredicted RBP7.6□□□□□ -1.19
VPS11-209ENST00000622309 NCF1CA8MVU1 366 aaPredicted RBP7.6□□□□□ -1.19
VPS11-209ENST00000622309 H0YCG3 227 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 H3BRB1 525 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 NIPSNAP2O75323 286 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 CREG1O75629 220 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 ICAM1P05362 532 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 FGF4P08620 206 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 FOSL2P15408 326 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 RHCEP18577 417 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 FPR1P21462 350 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 LCN1P31025 176 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 SDC2P34741 201 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 GSK3AP49840 483 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 ACLYP53396 1101 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 CAMK2GQ13555 558 aaPredicted RBP7.6□□□□□ -1.19
VPS11-209ENST00000622309 PWP1Q13610 501 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 TRAM2Q15035 370 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 EIF4HQ15056 248 aaKnown RBP7.6□□□□□ -1.19
VPS11-209ENST00000622309 UGT8Q16880 541 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 HFEQ30201 348 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 GTDC1Q4AE62 458 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 FAM76BQ5HYJ3 339 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 SLFN12LQ6IEE8 588 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 RAB12Q6IQ22 244 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 IGF2-ASQ6U949 168 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 TMEM107Q6UX40 140 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 B3GNT9Q6UX72 402 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 HSDL2Q6YN16 418 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 GDPGP1Q6ZNW5 385 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 ATCAYQ86WG3 371 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 MIB1Q86YT6 1006 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 ADGRF3Q8IZF5 1079 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 OR8J3Q8NGG0 315 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 CREB3L4Q8TEY5 395 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 SFXN2Q96NB2 322 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 KCTD15Q96SI1 283 aaPredicted RBP7.6□□□□□ -1.19
VPS11-209ENST00000622309 PARK7Q99497 189 aaKnown RBP7.6□□□□□ -1.19
VPS11-209ENST00000622309 SLC38A3Q99624 504 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 HTATIP2Q9BUP3 242 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 ACTR6Q9GZN1 396 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 GABARAPL1Q9H0R8 117 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 RGS18Q9NS28 235 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 DCAF13Q9NV06 445 aaKnown RBP7.6□□□□□ -1.19
VPS11-209ENST00000622309 PPP1R14DQ9NXH3 145 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 NDUFAF4Q9P032 175 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 CLCA2Q9UQC9 943 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 SLC6A5Q9Y345 797 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 TP53BP1Q12888 1972 aaPredicted RBP7.6□□□□□ -1.19
VPS11-209ENST00000622309 FGF2P09038 288 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 HOXA9P31269 272 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 PSMD4P55036 377 aaKnown RBP7.6□□□□□ -1.19
VPS11-209ENST00000622309 KIAA1024LP59773 190 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 STX4Q12846 297 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 PFKFB4Q16877 469 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 TPGS2Q68CL5 300 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 FAM198BQ6UWH4 519 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 DLEU7Q6UYE1 221 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 MFSD6LQ8IWD5 586 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 CARFQ8N187 725 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 RYBPQ8N488 228 aaPredicted RBP7.6□□□□□ -1.19
VPS11-209ENST00000622309 DPP10Q8N608 796 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 ZNF548Q8NEK5 533 aaPredicted RBP7.6□□□□□ -1.19
VPS11-209ENST00000622309 OR4F6Q8NGB9 312 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 MOSPD2Q8NHP6 518 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 C2CD4CQ8TF44 421 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 AP3S1Q92572 193 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 ZBTB45Q96K62 511 aaPredicted RBP7.6□□□□□ -1.19
VPS11-209ENST00000622309 KCNC2Q96PR1 638 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 PITX2Q99697 317 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 H2AFJQ9BTM1 129 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 EDEM2Q9BV94 578 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 ACPTQ9BZG2 426 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 BTBD1Q9H0C5 482 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 RIMS4Q9H426 269 aaPredicted RBP7.6□□□□□ -1.19
VPS11-209ENST00000622309 COMMD3Q9UBI1 195 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 PCDHGA6Q9Y5G7 932 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 FAM221AA4D161 298 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 ARGFXA6NJG6 315 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 ZNF670-ZNF695F2Z2N8 137 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 QSOX1O00391 747 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 PER2O15055 1255 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 MFSD11O43934 449 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 SELENOFO60613 162 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 POP7O75817 140 aaKnown RBP7.6□□□□□ -1.19
VPS11-209ENST00000622309 CCNB2O95067 398 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 OAZ2O95190 189 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 CCNDBP1O95273 360 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 ITGB8P26012 769 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 MAGEA2P43356 314 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 SLC14A2Q15849 920 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 CD276Q5ZPR3 534 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 SCIMPQ6UWF3 145 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 HSD17B13Q7Z5P4 300 aaPredicted RBP7.6□□□□□ -1.19
VPS11-209ENST00000622309 PTGR2Q8N8N7 351 aaPredicted RBP7.6□□□□□ -1.19
VPS11-209ENST00000622309 ZNF454Q8N9F8 522 aa7.6□□□□□ -1.19
VPS11-209ENST00000622309 EXOSC8Q96B26 276 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms