RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 RNF165Q6ZSG1 346 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 OVCH1Q7RTY7 1134 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 LRRC34Q8IZ02 419 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 FAM47BQ8NA70 645 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 STT3BQ8TCJ2 826 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 SERINC2Q96SA4 455 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 SPSB2Q99619 263 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 EBF4Q9BQW3 602 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 C1orf50Q9BV19 199 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 CCDC134Q9H6E4 229 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 AKTIPQ9H8T0 292 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 LRTM1Q9HBL6 345 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 DAPP1Q9UN19 280 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 ASB4Q9Y574 426 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 MYOCOSA0A1B0GUC4 107 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 SLC28A1O00337 649 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 HDAC3O15379 428 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 EFSO43281 561 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 B3GALT2O43825 422 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 SEC22BO75396 215 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 RSL1D1O76021 490 aaKnown RBP12.87□□□□□ -0.35
NEK3-210ENST00000620675 BMP10O95393 424 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 AGXTP21549 392 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 RPL38P63173 70 aaKnown RBP12.87□□□□□ -0.35
NEK3-210ENST00000620675 ZNF33BQ06732 778 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 ACSM2AQ08AH3 577 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 DNASE1L3Q13609 305 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 MAP7Q14244 749 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 C6orf136Q5SQH8 315 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 ACSM2BQ68CK6 577 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 NUDT13Q86X67 352 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 RFWD2Q8NHY2 731 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 SNIP1Q8TAD8 396 aaKnown RBP12.87□□□□□ -0.35
NEK3-210ENST00000620675 TUBGCP3Q96CW5 907 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 EGLN2Q96KS0 407 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 ZNF317Q96PQ6 595 aaPredicted RBP12.87□□□□□ -0.35
NEK3-210ENST00000620675 CENPKQ9BS16 269 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 MEAF6Q9HAF1 191 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 LANCL2Q9NS86 450 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 DKK4Q9UBT3 224 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 CDC14AQ9UNH5 594 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 USH1CQ9Y6N9 552 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 IGLV3-12A0A075B6K2 115 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 A0A1W2PR48 441 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 GLOD5A6NK44 160 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 TGFBR3LH3BV60 316 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 CYR61O00622 381 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 RGS14O43566 566 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 PCDH7O60245 1069 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 B4GALT2O60909 372 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 SNUPNO95149 360 aaKnown RBP12.86□□□□□ -0.35
NEK3-210ENST00000620675 ZGLP1P0C6A0 271 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 EIF2S3P41091 472 aaKnown RBP12.86□□□□□ -0.35
NEK3-210ENST00000620675 SEC24CP53992 1094 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 BTG2P78543 158 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 KLC1Q07866 573 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 EFCAB3Q8N7B9 438 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 SRFBP1Q8NEF9 429 aaKnown RBP12.86□□□□□ -0.35
NEK3-210ENST00000620675 CLHC1Q8NHS4 586 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 DCBLD2Q96PD2 775 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 OR52B2Q96RD2 323 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 DPH2Q9BQC3 489 aaPredicted RBP12.86□□□□□ -0.35
NEK3-210ENST00000620675 ACTL8Q9H568 366 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 C1orf109Q9NX04 203 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 C5AR2Q9P296 337 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 BAIAP2L1Q9UHR4 511 aa12.86□□□□□ -0.35
NEK3-210ENST00000620675 A0A1W2PS29 197 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 VSTM2BA6NLU5 285 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 KLK10O43240 276 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 UMODP07911 640 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 VIMP08670 466 aaKnown RBP12.85□□□□□ -0.35
NEK3-210ENST00000620675 FAM58BPP0C7Q3 252 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 PRPH2P23942 346 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 TIA1P31483 386 aaKnown RBP eCLIP12.85□□□□□ -0.35
NEK3-210ENST00000620675 MC1RQ01726 317 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 TGM3Q08188 693 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 IL10RAQ13651 578 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 CCNYL2Q5T2Q4 361 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 ATP1A1-AS1Q5TC04 95 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 NOXRED1Q6NXP6 359 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 FAM180BQ6P0A1 224 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 ZCCHC7Q8N3Z6 543 aaKnown RBP12.85□□□□□ -0.35
NEK3-210ENST00000620675 KCNE4Q8WWG9 221 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 NPHS2Q9NP85 383 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 ZNF282Q9UDV7 671 aaPredicted RBP12.85□□□□□ -0.35
NEK3-210ENST00000620675 PTRH2Q9Y3E5 179 aaKnown RBP12.85□□□□□ -0.35
NEK3-210ENST00000620675 NPIPB8E9PQR5 432 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 PGRMC2O15173 223 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 RECKO95980 971 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 PRR35P0CG20 571 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 ITPKBP27987 946 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 SPIN4Q56A73 249 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 TMEM198Q66K66 360 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 FAAH2Q6GMR7 532 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 GALNT18Q6P9A2 607 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 CYP20A1Q6UW02 462 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 LARP4Q71RC2 724 aaKnown RBP eCLIP12.85□□□□□ -0.35
NEK3-210ENST00000620675 ZNF248Q8NDW4 579 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 CDC26Q8NHZ8 85 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 TSLPQ969D9 159 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms