RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 ILKAPQ9H0C8 392 aaPredicted RBP23.35■■□□□ 1.33
PMS1-220ENST00000618056 PRM3Q9NNZ6 103 aa23.35■■□□□ 1.33
PMS1-220ENST00000618056 LUZP4Q9P127 313 aa23.35■■□□□ 1.33
PMS1-220ENST00000618056 DCDC2Q9UHG0 476 aa23.35■■□□□ 1.33
PMS1-220ENST00000618056 CSAG2Q9Y5P2 127 aa23.35■■□□□ 1.33
PMS1-220ENST00000618056 A0A1W2PPM1 405 aa23.34■■□□□ 1.33
PMS1-220ENST00000618056 FOXE1O00358 373 aaPredicted RBP23.34■■□□□ 1.33
PMS1-220ENST00000618056 CDH16O75309 829 aa23.34■■□□□ 1.33
PMS1-220ENST00000618056 SLC26A5P58743 744 aa23.34■■□□□ 1.33
PMS1-220ENST00000618056 HERVK_113P63132 956 aa23.34■■□□□ 1.33
PMS1-220ENST00000618056 CUL3Q13618 768 aa23.34■■□□□ 1.33
PMS1-220ENST00000618056 IGFBP7Q16270 282 aa23.34■■□□□ 1.33
PMS1-220ENST00000618056 RNF175Q8N4F7 328 aa23.34■■□□□ 1.33
PMS1-220ENST00000618056 TMEM52Q8NDY8 209 aa23.34■■□□□ 1.33
PMS1-220ENST00000618056 DNAJB14Q8TBM8 379 aa23.34■■□□□ 1.33
PMS1-220ENST00000618056 MAGEB10Q96LZ2 347 aaPredicted RBP23.34■■□□□ 1.33
PMS1-220ENST00000618056 ERVK-6Q9BXR3 956 aa23.34■■□□□ 1.33
PMS1-220ENST00000618056 SEMA4BQ9NPR2 832 aaPredicted RBP23.34■■□□□ 1.33
PMS1-220ENST00000618056 PRTFDC1Q9NRG1 225 aa23.34■■□□□ 1.33
PMS1-220ENST00000618056 TEKT2Q9UIF3 430 aa23.34■■□□□ 1.33
PMS1-220ENST00000618056 CLDN16Q9Y5I7 305 aa23.34■■□□□ 1.33
PMS1-220ENST00000618056 SYNDIG1LA6NDD5 238 aa23.33■■□□□ 1.33
PMS1-220ENST00000618056 RTCAO00442 366 aaKnown RBP23.33■■□□□ 1.33
PMS1-220ENST00000618056 SH3BGRLO75368 114 aa23.33■■□□□ 1.33
PMS1-220ENST00000618056 ARL1P40616 181 aaPredicted RBP23.33■■□□□ 1.33
PMS1-220ENST00000618056 SSR2P43308 183 aa23.33■■□□□ 1.33
PMS1-220ENST00000618056 SLCO1A2P46721 670 aa23.33■■□□□ 1.33
PMS1-220ENST00000618056 HNRNPFP52597 415 aaKnown RBP23.33■■□□□ 1.33
PMS1-220ENST00000618056 RPS13P62277 151 aaKnown RBP23.33■■□□□ 1.33
PMS1-220ENST00000618056 KCNC4Q03721 635 aa23.33■■□□□ 1.33
PMS1-220ENST00000618056 INPP5JQ15735 1006 aaPredicted RBP23.33■■□□□ 1.33
PMS1-220ENST00000618056 ERCC6LQ2NKX8 1250 aa23.33■■□□□ 1.33
PMS1-220ENST00000618056 OR4C11Q6IEV9 310 aa23.33■■□□□ 1.33
PMS1-220ENST00000618056 CUZD1Q86UP6 607 aa23.33■■□□□ 1.33
PMS1-220ENST00000618056 IQCKQ8N0W5 287 aa23.33■■□□□ 1.33
PMS1-220ENST00000618056 FAM47BQ8NA70 645 aa23.33■■□□□ 1.33
PMS1-220ENST00000618056 AENQ8WTP8 325 aaKnown RBP23.33■■□□□ 1.33
PMS1-220ENST00000618056 HAS2Q92819 552 aa23.33■■□□□ 1.33
PMS1-220ENST00000618056 CSF3RQ99062 836 aa23.33■■□□□ 1.33
PMS1-220ENST00000618056 RNF32Q9H0A6 362 aa23.33■■□□□ 1.33
PMS1-220ENST00000618056 PLAAQ9Y263 795 aa23.33■■□□□ 1.33
PMS1-220ENST00000618056 PCDHGA10Q9Y5H3 936 aa23.33■■□□□ 1.33
PMS1-220ENST00000618056 BLACEA4D250 179 aa23.32■■□□□ 1.32
PMS1-220ENST00000618056 SAGE2PA6NJ88 616 aa23.32■■□□□ 1.32
PMS1-220ENST00000618056 DLX3O60479 287 aa23.32■■□□□ 1.32
PMS1-220ENST00000618056 OTCP00480 354 aa23.32■■□□□ 1.32
PMS1-220ENST00000618056 ATP5F1P24539 256 aaPredicted RBP23.32■■□□□ 1.32
PMS1-220ENST00000618056 RAP1GDS1P52306 607 aa23.32■■□□□ 1.32
PMS1-220ENST00000618056 TLR1Q15399 786 aa23.32■■□□□ 1.32
PMS1-220ENST00000618056 TERF2Q15554 542 aa23.32■■□□□ 1.32
PMS1-220ENST00000618056 B3GNTL1Q67FW5 361 aaPredicted RBP23.32■■□□□ 1.32
PMS1-220ENST00000618056 EMBQ6PCB8 327 aa23.32■■□□□ 1.32
PMS1-220ENST00000618056 SLC22A9Q8IVM8 553 aa23.32■■□□□ 1.32
PMS1-220ENST00000618056 CYP4X1Q8N118 509 aa23.32■■□□□ 1.32
PMS1-220ENST00000618056 EPS8L3Q8TE67 593 aaKnown RBP23.32■■□□□ 1.32
PMS1-220ENST00000618056 MAPKAP1Q9BPZ7 522 aa23.32■■□□□ 1.32
PMS1-220ENST00000618056 DYTNA2CJ06 578 aa23.31■■□□□ 1.32
PMS1-220ENST00000618056 SAP18O00422 153 aaKnown RBP23.31■■□□□ 1.32
PMS1-220ENST00000618056 PLPP1O14494 284 aa23.31■■□□□ 1.32
PMS1-220ENST00000618056 GLRA3O75311 464 aa23.31■■□□□ 1.32
PMS1-220ENST00000618056 NUDT17P0C025 328 aa23.31■■□□□ 1.32
PMS1-220ENST00000618056 KRT15P19012 456 aa23.31■■□□□ 1.32
PMS1-220ENST00000618056 SLC13A2Q13183 592 aa23.31■■□□□ 1.32
PMS1-220ENST00000618056 ZNF678Q5SXM1 525 aa23.31■■□□□ 1.32
PMS1-220ENST00000618056 FRG2Q64ET8 278 aa23.31■■□□□ 1.32
PMS1-220ENST00000618056 RPS27LQ71UM5 84 aaKnown RBP23.31■■□□□ 1.32
PMS1-220ENST00000618056 MILR1Q7Z6M3 343 aa23.31■■□□□ 1.32
PMS1-220ENST00000618056 ZCCHC7Q8N3Z6 543 aaKnown RBP23.31■■□□□ 1.32
PMS1-220ENST00000618056 EFCAB3Q8N7B9 438 aa23.31■■□□□ 1.32
PMS1-220ENST00000618056 OR4F6Q8NGB9 312 aa23.31■■□□□ 1.32
PMS1-220ENST00000618056 ELP5Q8TE02 316 aa23.31■■□□□ 1.32
PMS1-220ENST00000618056 FRG2BQ96QU4 278 aa23.31■■□□□ 1.32
PMS1-220ENST00000618056 ZNF717Q9BY31 904 aaPredicted RBP23.31■■□□□ 1.32
PMS1-220ENST00000618056 KCNK13Q9HB14 408 aa23.31■■□□□ 1.32
PMS1-220ENST00000618056 SPACA6W5XKT8 324 aa23.31■■□□□ 1.32
PMS1-220ENST00000618056 SMIM23A6NLE4 172 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 TGFBR3LH3BV60 316 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 CTNSO60931 367 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 IMPDH1P20839 514 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 NEK2P51955 445 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 PRKAA2P54646 552 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 CDH13P55290 713 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 ARG2P78540 354 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 ZNF169Q14929 603 aaPredicted RBP23.3■■□□□ 1.32
PMS1-220ENST00000618056 ABHD17BQ5VST6 288 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 NFAM1Q8NET5 270 aaPredicted RBP23.3■■□□□ 1.32
PMS1-220ENST00000618056 TMEM237Q96Q45 408 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 CLMPQ9H6B4 373 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 EMCNQ9ULC0 261 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 LRRK2Q5S007 2527 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 A0A1B0GTL3 188 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 FOXO6A8MYZ6 492 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 PPP6CO00743 305 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 SEMA3DO95025 777 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 ETHE1O95571 254 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 CCT5P48643 541 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 TNFSF10P50591 281 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 CLCQ05315 142 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 UNC50Q53HI1 259 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 PRR30Q53SZ7 412 aaPredicted RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms