RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 FAM9CQ8IZT9 166 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 FLVCR1-AS1Q8TAF5 88 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 MAGEE2Q8TD90 523 aaPredicted RBP7.41□□□□□ -1.22
NEK3-207ENST00000617054 GPBAR1Q8TDU6 330 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 LMX1AQ8TE12 382 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 ZFP90Q8TF47 636 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 MS4A6EQ96DS6 147 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 TPD52L3Q96J77 140 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 CCDC115Q96NT0 180 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 SH3GL1Q99961 368 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 CXorf36Q9H7Y0 433 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 IL21RQ9HBE5 538 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 OR6C2Q9NZP2 312 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 AP4B1Q9Y6B7 739 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 UNC13CQ8NB66 2214 aa7.41□□□□□ -1.22
NEK3-207ENST00000617054 CHURC1-FNTBB4DL54 471 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 hCG_2039718K7EN88 272 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 CAPN5O15484 640 aaPredicted RBP7.4□□□□□ -1.22
NEK3-207ENST00000617054 HNRNPRO43390 633 aaKnown RBP7.4□□□□□ -1.22
NEK3-207ENST00000617054 GNAO1P09471 354 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 VAMP1P23763 118 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 SHMT2P34897 504 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 CHI3L1P36222 383 aaPredicted RBP7.4□□□□□ -1.22
NEK3-207ENST00000617054 FEN1P39748 380 aaKnown RBP7.4□□□□□ -1.22
NEK3-207ENST00000617054 TRPC1P48995 793 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 PRKAG1P54619 331 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 HHEXQ03014 270 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 MED21Q13503 144 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 DPY19L1Q2PZI1 675 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 ZIK1Q3SY52 487 aaPredicted RBP7.4□□□□□ -1.22
NEK3-207ENST00000617054 TNFAIP8L2Q6P589 184 aaPredicted RBP7.4□□□□□ -1.22
NEK3-207ENST00000617054 TMEM154Q6P9G4 183 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 VN1R4Q7Z5H5 301 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 ZC3H7AQ8IWR0 971 aaKnown RBP7.4□□□□□ -1.22
NEK3-207ENST00000617054 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.4□□□□□ -1.22
NEK3-207ENST00000617054 OR4N5Q8IXE1 308 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 ACOT4Q8N9L9 421 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 ZDHHC1Q8WTX9 485 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 RAB8BQ92930 207 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 SLC47A1Q96FL8 570 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 SPOCK3Q9BQ16 436 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 YIPF4Q9BSR8 244 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 TRIM4Q9C037 500 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 NTN4Q9HB63 628 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 MYNNQ9NPC7 610 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 UCKL1Q9NWZ5 548 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 ACTR10Q9NZ32 417 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 AHSPQ9NZD4 102 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 DLGAP2Q9P1A6 1054 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 MRPS2Q9Y399 296 aaKnown RBP7.4□□□□□ -1.22
NEK3-207ENST00000617054 HEBP2Q9Y5Z4 205 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 TRBC2A0A5B9 178 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 EI24O14681 340 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 KCNJ13O60928 360 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 IGLV3-19P01714 112 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 ZNF888P0CJ79 500 aaPredicted RBP7.4□□□□□ -1.22
NEK3-207ENST00000617054 DDCP20711 480 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 CD38P28907 300 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 YAP1P46937 504 aaKnown RBP7.4□□□□□ -1.22
NEK3-207ENST00000617054 CCT8P50990 548 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 CCR5P51681 352 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 STARD6P59095 220 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 DUSP2Q05923 314 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 ZIC1Q15915 447 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 FXNQ16595 210 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 DEFB134Q4QY38 66 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 PARGQ86W56 976 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 NUDT13Q86X67 352 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 ZZZ3Q8IYH5 903 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 CCDC116Q8IYX3 515 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 ADCY4Q8NFM4 1077 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 DUS3LQ96G46 650 aaKnown RBP7.4□□□□□ -1.22
NEK3-207ENST00000617054 VCX3BQ9H321 246 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 GORASP2Q9H8Y8 452 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 FSCN3Q9NQT6 498 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 PRDM7Q9NQW5 492 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 DCAF13Q9NV06 445 aaKnown RBP7.4□□□□□ -1.22
NEK3-207ENST00000617054 TMEM184CQ9NVA4 438 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 KLHL3Q9UH77 587 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 ATP6V1HQ9UI12 483 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 PCOLCE2Q9UKZ9 415 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 FAF1Q9UNN5 650 aaPredicted RBP7.4□□□□□ -1.22
NEK3-207ENST00000617054 LHX6Q9UPM6 363 aa7.4□□□□□ -1.22
NEK3-207ENST00000617054 SEC16AO15027 2179 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 A0A1W2PR48 441 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 METTL12A8MUP2 240 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 RNASET2O00584 256 aaKnown RBP7.4□□□□□ -1.23
NEK3-207ENST00000617054 ACOX3O15254 700 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 KIF1CO43896 1103 aaKnown RBP7.4□□□□□ -1.23
NEK3-207ENST00000617054 NOBOXO60393 691 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 B4GALT2O60909 372 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 ZNF217O75362 1048 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 SEC24DO94855 1032 aaPredicted RBP7.4□□□□□ -1.23
NEK3-207ENST00000617054 FKBP9O95302 570 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 CST1P01037 141 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 GPIP06744 558 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 FAM58BPP0C7Q3 252 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 GPX2P18283 190 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 IL1RNP18510 177 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 OR1E2P47887 323 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms