RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	FAM32A	Q9Y421	112 aa	Known RBP	13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	KIAA1549L	Q6ZVL6	1849 aa		13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TBC1D3B	A6NDS4	549 aa		13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	HEPACAM2	A8MVW5	462 aa		13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SLC9A3R1	O14745	358 aa	Predicted RBP	13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	LILRB5	O75023	590 aa		13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	WBP4	O75554	376 aa	Known RBP	13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	NADK	O95544	446 aa	Predicted RBP	13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SRPRA	P08240	638 aa	Known RBP	13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	MVD	P53602	400 aa		13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	HTRA4	P83105	476 aa	Predicted RBP	13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PPIG	Q13427	754 aa	Known RBP eCLIP	13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TMIGD1	Q6UXZ0	262 aa		13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	NLRP8	Q86W28	1048 aa		13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	NLGN4X	Q8N0W4	816 aa		13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	OR8D1	Q8WZ84	308 aa		13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	KLK6	Q92876	244 aa		13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	F2RL3	Q96RI0	385 aa		13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ZCCHC2	Q9C0B9	1178 aa	Known RBP	13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	DEC1	Q9P2X7	70 aa		13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SLC23A2	Q9UGH3	650 aa		13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RNF6	Q9Y252	685 aa		13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PCDHGA6	Q9Y5G7	932 aa		13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	LYVE1	Q9Y5Y7	322 aa		13.27	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PRAMEF25	A6NGN4	478 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TRIM64B	A6NI03	449 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CDK2AP1	O14519	115 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	FGF19	O95750	216 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ADH1C	P00326	375 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	OCM2	P0CE71	109 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	OCM	P0CE72	109 aa	Predicted RBP	13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	POU1F1	P28069	291 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CCR3	P51677	355 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CNTN1	Q12860	1018 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PRAMEF14	Q5SWL7	426 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PRAMEF13	Q5VWM6	474 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	IGFN1	Q86VF2	1251 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	P2RY8	Q86VZ1	359 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CELF5	Q8N6W0	485 aa	Known RBP	13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	OR10G2	Q8NGC3	310 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	RBM14	Q96PK6	669 aa	Known RBP	13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	FERD3L	Q96RJ6	166 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	EFCAB11	Q9BUY7	163 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	LGR4	Q9BXB1	951 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	DUSP21	Q9H596	190 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CUEDC1	Q9NWM3	386 aa	Predicted RBP	13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CORO2B	Q9UQ03	480 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	NOX1	Q9Y5S8	564 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	IRAK3	Q9Y616	596 aa		13.27	□□□□□ -0.29
CACNA1C-231	ENST00000616390	FAM227A	F5H4B4	570 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PCDH17	O14917	1159 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PPIB	P23284	216 aa	Known RBP	13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PTGER1	P34995	402 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PCGF2	P35227	344 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	IDUA	P35475	653 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ST13	P50502	369 aa	Known RBP	13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CDK6	Q00534	326 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CAMK1	Q14012	370 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ZNF234	Q14588	700 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390		Q6ZNX1	250 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ADCK2	Q7Z695	626 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ADCK1	Q86TW2	530 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	NRSN1	Q8IZ57	195 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	LGI4	Q8N135	537 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CENPS	Q8N2Z9	138 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PGBD3	Q8N328	593 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	APH1B	Q8WW43	257 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SMG7	Q92540	1137 aa	Known RBP	13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	RAB8B	Q92930	207 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	LRIG1	Q96JA1	1093 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ALPK1	Q96QP1	1244 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ZDHHC5	Q9C0B5	715 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	BHLHE41	Q9C0J9	482 aa	Predicted RBP	13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ACOT13	Q9NPJ3	140 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	MARK1	Q9P0L2	795 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SLC6A14	Q9UN76	642 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PRAMEF33	A0A0G2JMD5	474 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390		A0A1W2PRQ8	180 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ANKDD1B	A6NHY2	528 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390		H7BY64	318 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PRAMEF10	O60809	474 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	KLHL18	O94889	574 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	EPHX1	P07099	455 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SLC19A1	P41440	591 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ZNF33B	Q06732	778 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	HSPB3	Q12988	150 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TEAD4	Q15561	434 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	IFI44L	Q53G44	452 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PPP2R2D	Q66LE6	453 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	HMGN2P46	Q86SG4	172 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	FBLIM1	Q8WUP2	373 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TFG	Q92734	400 aa	Predicted RBP	13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PRAP1	Q96NZ9	151 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	RAD9A	Q99638	391 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	COPS4	Q9BT78	406 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TAS2R9	Q9NYW1	312 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	IL20	Q9NYY1	176 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	GPR37L1	O60883	481 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms