RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 FLYWCH1Q4VC44 716 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 ATG9BQ674R7 924 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 DNM1P34Q6PK57 102 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 ARHGAP22Q7Z5H3 698 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 OR2AJ1Q8NGZ0 328 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 SERINC2Q96SA4 455 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 LPAR4Q99677 370 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 ASPNQ9BXN1 380 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 EPB41L1Q9H4G0 881 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 MMP17Q9ULZ9 603 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 COL4A1P02462 1669 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 FADS2O95864 444 aaKnown RBP9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 CCR7P32248 378 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 NKX3-2P78367 333 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 PLCXD2Q0VAA5 305 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 GRB7Q14451 532 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 C1orf189Q5VU69 101 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 OR2T5Q6IEZ7 315 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 DUS1LQ6P1R4 473 aaKnown RBP9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 SMARCD3Q6STE5 483 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 HDDC2Q7Z4H3 204 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 TRIM73Q86UV7 250 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 ATCAYQ86WG3 371 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 OR2T29Q8NH02 315 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 AP3S1Q92572 193 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 ZSWIM3Q96MP5 696 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 TXLNGYQ9BZA5 131 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 TAAR2Q9P1P5 351 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 MED31Q9Y3C7 131 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 PCDHGB7Q9Y5F8 929 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 EVPLQ92817 2033 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 AQP9O43315 295 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 CD63P08962 238 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 IGFBP6P24592 240 aaPredicted RBP9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 GABRA3P34903 492 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 SERTAD2Q14140 314 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 NDUFAF6Q330K2 333 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 ZNF57Q68EA5 555 aaPredicted RBP9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 MAFAQ8NHW3 353 aaPredicted RBP9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 CEP76Q8TAP6 659 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 PNPLA2Q96AD5 504 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 PYURFQ96I23 114 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 SPATA9Q9BWV2 254 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 BRF2Q9HAW0 419 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 B3GAT2Q9NPZ5 323 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 B4GALT7Q9UBV7 327 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 SLC7A8Q9UHI5 535 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 RTCAO00442 366 aaKnown RBP9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 POLR1CO15160 346 aaPredicted RBP9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 OR5F1O95221 314 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 ACVR2AP27037 513 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 MAOBP27338 520 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 B3GNT6Q6ZMB0 384 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 MSANTD1Q6ZTZ1 278 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 PTERQ96BW5 349 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 PEX11GQ96HA9 241 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 TVP23BQ9NYZ1 205 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 MYH15Q9Y2K3 1946 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 SBF2Q86WG5 1849 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 LOXHD1Q8IVV2 1947 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 MROH6A6NGR9 719 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 TP73O15350 636 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 IGLV3-27P01718 113 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 XRCC1P18887 633 aaPredicted RBP9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 CAPGP40121 348 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 ARFIP1P53367 373 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 ERVPABLB-1P60509 514 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 SHC2P98077 582 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 DEFB110Q30KQ9 67 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 KCTD11Q693B1 232 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 NANOGNBQ7Z5D8 188 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 RAB8BQ92930 207 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 TMCO6Q96DC7 493 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 HSH2DQ96JZ2 352 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 ZNF624Q9P2J8 865 aaPredicted RBP9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 LRIT1Q9P2V4 623 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 TMEM5Q9Y2B1 443 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 HS3ST3A1Q9Y663 406 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 PRSS21Q9Y6M0 314 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 LRRC37AA6NMS7 1700 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 GJB3O75712 270 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 HOXC8P31273 242 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 RORAP35398 523 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 CDKL1Q00532 357 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 KCNC4Q03721 635 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 MPP2Q14168 576 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 C18orf21Q32NC0 220 aaPredicted RBP9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 UBAP2Q5T6F2 1119 aaKnown RBP9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 COMMD6Q7Z4G1 85 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 RASGEF1AQ8N9B8 481 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 WFDC5Q8TCV5 224 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 WDR60Q8WVS4 1066 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 PDLIM5Q96HC4 596 aaKnown RBP9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 TMEM74Q96NL1 305 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 OR51V1Q9H2C8 321 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 POFUT2Q9Y2G5 429 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 SCAMP2O15127 329 aaKnown RBP9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 HTRA2O43464 458 aaPredicted RBP9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 IGLV3-25P01717 112 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms