RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 ACSL3O95573 720 aa23.56■■□□□ 1.36
VEGFA-227ENST00000615393 ALDOAP04075 364 aaKnown RBP23.56■■□□□ 1.36
VEGFA-227ENST00000615393 INHBAP08476 426 aa23.56■■□□□ 1.36
VEGFA-227ENST00000615393 ST13P50502 369 aaKnown RBP23.56■■□□□ 1.36
VEGFA-227ENST00000615393 HNRNPFP52597 415 aaKnown RBP23.56■■□□□ 1.36
VEGFA-227ENST00000615393 ALDH18A1P54886 795 aaKnown RBP23.56■■□□□ 1.36
VEGFA-227ENST00000615393 MLF1P58340 268 aa23.56■■□□□ 1.36
VEGFA-227ENST00000615393 PMP22Q01453 160 aa23.56■■□□□ 1.36
VEGFA-227ENST00000615393 SETDB1Q15047 1291 aa23.56■■□□□ 1.36
VEGFA-227ENST00000615393 PFKFB4Q16877 469 aa23.56■■□□□ 1.36
VEGFA-227ENST00000615393 TAOK1Q7L7X3 1001 aa23.56■■□□□ 1.36
VEGFA-227ENST00000615393 FAM98AQ8NCA5 519 aaKnown RBP23.56■■□□□ 1.36
VEGFA-227ENST00000615393 TMEM52Q8NDY8 209 aa23.56■■□□□ 1.36
VEGFA-227ENST00000615393 OR7G3Q8NG95 312 aa23.56■■□□□ 1.36
VEGFA-227ENST00000615393 ADAP2Q9NPF8 381 aa23.56■■□□□ 1.36
VEGFA-227ENST00000615393 SEC14L3Q9UDX4 400 aa23.56■■□□□ 1.36
VEGFA-227ENST00000615393 IKBKGQ9Y6K9 419 aa23.56■■□□□ 1.36
VEGFA-227ENST00000615393 SPACA6W5XKT8 324 aa23.56■■□□□ 1.36
VEGFA-227ENST00000615393 CYR61O00622 381 aa23.55■■□□□ 1.36
VEGFA-227ENST00000615393 UNC5CO95185 931 aa23.55■■□□□ 1.36
VEGFA-227ENST00000615393 MLYCDO95822 493 aa23.55■■□□□ 1.36
VEGFA-227ENST00000615393 MST1P26927 711 aa23.55■■□□□ 1.36
VEGFA-227ENST00000615393 CYB561P49447 251 aa23.55■■□□□ 1.36
VEGFA-227ENST00000615393 APCDD1LQ8NCL9 501 aa23.55■■□□□ 1.36
VEGFA-227ENST00000615393 SLC44A1Q8WWI5 657 aa23.55■■□□□ 1.36
VEGFA-227ENST00000615393 CMTM7Q96FZ5 175 aa23.55■■□□□ 1.36
VEGFA-227ENST00000615393 VMP1Q96GC9 406 aa23.55■■□□□ 1.36
VEGFA-227ENST00000615393 CSF3RQ99062 836 aa23.55■■□□□ 1.36
VEGFA-227ENST00000615393 HES7Q9BYE0 225 aa23.55■■□□□ 1.36
VEGFA-227ENST00000615393 VPS11Q9H270 941 aa23.55■■□□□ 1.36
VEGFA-227ENST00000615393 CLDN16Q9Y5I7 305 aa23.55■■□□□ 1.36
VEGFA-227ENST00000615393 TRBV11-1A0A0K0K1C0 115 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 TGFBR3LH3BV60 316 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 CTNSO60931 367 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 NEURL1O76050 574 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 TGFB1P01137 390 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 SP1P08047 785 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 ATP5A1P25705 553 aaKnown RBP23.54■■□□□ 1.36
VEGFA-227ENST00000615393 SERPINB9P50453 376 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 RBPJQ06330 500 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 AP5B1Q2VPB7 878 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 UBAP2Q5T6F2 1119 aaKnown RBP23.54■■□□□ 1.36
VEGFA-227ENST00000615393 LIPJQ5W064 366 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 SLC25A25Q6KCM7 469 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 ZNF793Q6ZN11 406 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 UBE3DQ7Z6J8 389 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 CLNKQ7Z7G1 428 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 MYLK4Q86YV6 388 aaPredicted RBP23.54■■□□□ 1.36
VEGFA-227ENST00000615393 ARMC10Q8N2F6 343 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 TMEM132CQ8N3T6 1108 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 ACOT4Q8N9L9 421 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 CCDC77Q9BR77 488 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 CENPKQ9BS16 269 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 ACTR8Q9H981 624 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 FBXW2Q9UKT8 454 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 PPIEQ9UNP9 301 aaKnown RBP23.54■■□□□ 1.36
VEGFA-227ENST00000615393 TNPO3Q9Y5L0 923 aaKnown RBP23.54■■□□□ 1.36
VEGFA-227ENST00000615393 HIVEP3Q5T1R4 2406 aa23.54■■□□□ 1.36
VEGFA-227ENST00000615393 KLK8O60259 260 aa23.53■■□□□ 1.36
VEGFA-227ENST00000615393 SLC25A12O75746 678 aa23.53■■□□□ 1.36
VEGFA-227ENST00000615393 IFNA16P05015 189 aa23.53■■□□□ 1.36
VEGFA-227ENST00000615393 HIST1H1TP22492 207 aaPredicted RBP23.53■■□□□ 1.36
VEGFA-227ENST00000615393 TRHRP34981 398 aaPredicted RBP23.53■■□□□ 1.36
VEGFA-227ENST00000615393 SSR2P43308 183 aa23.53■■□□□ 1.36
VEGFA-227ENST00000615393 PIK3CGP48736 1102 aa23.53■■□□□ 1.36
VEGFA-227ENST00000615393 HLCSP50747 726 aa23.53■■□□□ 1.36
VEGFA-227ENST00000615393 STX4Q12846 297 aa23.53■■□□□ 1.36
VEGFA-227ENST00000615393 PCBP2Q15366 365 aaKnown RBP eCLIP23.53■■□□□ 1.361e-10■■□□□ 11.4
VEGFA-227ENST00000615393 ELAVL1Q15717 326 aaKnown RBP23.53■■□□□ 1.36
VEGFA-227ENST00000615393 ZNF468Q5VIY5 522 aaPredicted RBP23.53■■□□□ 1.36
VEGFA-227ENST00000615393 C1QL3Q5VWW1 255 aa23.53■■□□□ 1.36
VEGFA-227ENST00000615393 KHDRBS2Q5VWX1 349 aaKnown RBP23.53■■□□□ 1.36
VEGFA-227ENST00000615393 HIST2H2BCQ6DN03 193 aa23.53■■□□□ 1.36
VEGFA-227ENST00000615393 METTL2BQ6P1Q9 378 aaKnown RBP23.53■■□□□ 1.36
VEGFA-227ENST00000615393 GALNTL5Q7Z4T8 443 aa23.53■■□□□ 1.36
VEGFA-227ENST00000615393 NCLNQ969V3 563 aa23.53■■□□□ 1.36
VEGFA-227ENST00000615393 TMEM125Q96AQ2 219 aa23.53■■□□□ 1.36
VEGFA-227ENST00000615393 GPR78Q96P69 363 aa23.53■■□□□ 1.36
VEGFA-227ENST00000615393 PAFAH2Q99487 392 aa23.53■■□□□ 1.36
VEGFA-227ENST00000615393 TRIM45Q9H8W5 580 aaPredicted RBP23.53■■□□□ 1.36
VEGFA-227ENST00000615393 KCMF1Q9P0J7 381 aa23.53■■□□□ 1.36
VEGFA-227ENST00000615393 CPSF2Q9P2I0 782 aaKnown RBP23.53■■□□□ 1.36
VEGFA-227ENST00000615393 PCDHGA11Q9Y5H2 935 aa23.53■■□□□ 1.36
VEGFA-227ENST00000615393 ASPDHA6ND91 283 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 RTCAO00442 366 aaKnown RBP23.52■■□□□ 1.36
VEGFA-227ENST00000615393 UGDHO60701 494 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 SH3BGRLO75368 114 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 SCELO95171 688 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 CLDN1O95832 211 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 PPP2R1BP30154 601 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 PIK3CBP42338 1070 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 PHEXP78562 749 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 SRSF11Q05519 484 aaKnown RBP23.52■■□□□ 1.36
VEGFA-227ENST00000615393 DDX39BQ13838 428 aaKnown RBP23.52■■□□□ 1.36
VEGFA-227ENST00000615393 SERTAD2Q14140 314 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 MAPKAPK3Q16644 382 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.52■■□□□ 1.361e-17■■■□□ 17
VEGFA-227ENST00000615393 DEPDC1Q5TB30 811 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 FJX1Q86VR8 437 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 C7orf57Q8NEG2 295 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms