RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 CCDC32Q9BV29 185 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 MKRN2Q9H000 416 aaKnown RBP11.3□□□□□ -0.6
CDH5-208ENST00000614547 CCDC59Q9P031 241 aaKnown RBP11.3□□□□□ -0.6
CDH5-208ENST00000614547 PCDHB11Q9Y5F2 797 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 LOC105369274A0A096LPK9 316 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 KLK1P06870 262 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 SERPINA4P29622 427 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 ITGA1P56199 1179 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 FADDQ13158 208 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 CRB2Q5IJ48 1285 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 SMARCD3Q6STE5 483 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 SLC38A6Q8IZM9 456 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 OR4N4Q8N0Y3 316 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 AP3S1Q92572 193 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 TMEM80Q96HE8 168 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 HRASLS5Q96KN8 279 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 CACYBPQ9HB71 228 aaKnown RBP11.3□□□□□ -0.6
CDH5-208ENST00000614547 IL26Q9NPH9 171 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 RBBP6Q7Z6E9 1792 aaKnown RBP11.3□□□□□ -0.6
CDH5-208ENST00000614547 SNTNA6NMZ2 147 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 CHURC1-FNTBB4DL54 471 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 UGT2B17O75795 530 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 ASGR1P07306 291 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 GATMP50440 423 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 BNC1Q01954 994 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 ANXA8L1Q5VT79 327 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 CBLL1Q75N03 491 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 TRAPPC5Q8IUR0 188 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 FAM46DQ8NEK8 389 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 CLP1Q92989 425 aaKnown RBP11.3□□□□□ -0.6
CDH5-208ENST00000614547 TTLL2Q9BWV7 592 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 SLC29A3Q9BZD2 475 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 NMNAT1Q9HAN9 279 aaPredicted RBP11.3□□□□□ -0.6
CDH5-208ENST00000614547 TMEM184CQ9NVA4 438 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 MRPL39Q9NYK5 338 aaKnown RBP11.3□□□□□ -0.6
CDH5-208ENST00000614547 IL17CQ9P0M4 197 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 SEC14L4Q9UDX3 406 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 ALG5Q9Y673 324 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 A0A1B0GVM2 712 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 HPGDSO60760 199 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 BMP1P13497 986 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 HOXD9P28356 352 aaPredicted RBP11.29□□□□□ -0.6
CDH5-208ENST00000614547 NNMTP40261 264 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 SUOXP51687 545 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 SGSHP51688 502 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 TAS2R50P59544 299 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 GALK2Q01415 458 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 TEAD4Q15561 434 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 PLAG1Q6DJT9 500 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 CNIH2Q6PI25 160 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 IL20RBQ6UXL0 311 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 ABI3BPQ7Z7G0 1075 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 SUSD3Q96L08 255 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 NELL2Q99435 816 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 HCSTQ9UBK5 93 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 TRPS1Q9UHF7 1281 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 PPIEQ9UNP9 301 aaKnown RBP11.29□□□□□ -0.6
CDH5-208ENST00000614547 KCNE2Q9Y6J6 123 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 C2orf78A6NCI8 922 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 CPSF4LA6NMK7 179 aaKnown RBP11.29□□□□□ -0.6
CDH5-208ENST00000614547 CATP04040 527 aaKnown RBP11.29□□□□□ -0.6
CDH5-208ENST00000614547 ERP29P30040 261 aaKnown RBP11.29□□□□□ -0.6
CDH5-208ENST00000614547 HNF1BP35680 557 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 RNF144AP50876 292 aaPredicted RBP11.29□□□□□ -0.6
CDH5-208ENST00000614547 RGNQ15493 299 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 FAM205BPQ63HN1 556 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 ANKRD54Q6NXT1 300 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 CEACAM20Q6UY09 585 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 FAM109AQ8N4B1 249 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 ZNF614Q8N883 585 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 TRIB2Q92519 343 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 RDH8Q9NYR8 311 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 MRPL15Q9P015 296 aaKnown RBP11.29□□□□□ -0.6
CDH5-208ENST00000614547 ENOPH1Q9UHY7 261 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 RPL36Q9Y3U8 105 aaKnown RBP11.29□□□□□ -0.6
CDH5-208ENST00000614547 PHIPQ8WWQ0 1821 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 A0A1W2PRB8 838 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 SMAD6O43541 496 aaKnown RBP11.29□□□□□ -0.6
CDH5-208ENST00000614547 DHFRP00374 187 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 GASTP01350 101 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 SMSP52788 366 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 P2RX3P56373 397 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 DOC2AQ14183 400 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 GINS1Q14691 196 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 SUZ12Q15022 739 aaKnown RBP11.29□□□□□ -0.6
CDH5-208ENST00000614547 KCNA10Q16322 511 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 IFNL1Q8IU54 200 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 APH1BQ8WW43 257 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 LRR1Q96L50 414 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 OR2A14Q96R47 310 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 SLA2Q9H6Q3 261 aa11.29□□□□□ -0.6
CDH5-208ENST00000614547 ZNF638Q14966 1978 aaKnown RBP11.29□□□□□ -0.6
CDH5-208ENST00000614547 GABRR3A8MPY1 467 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 E7EQ34 232 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 RTCAO00442 366 aaKnown RBP11.28□□□□□ -0.6
CDH5-208ENST00000614547 IGSF6O95976 241 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 PRLP01236 227 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 CHMP24386 653 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 MAP4K2Q12851 820 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 GPR19Q15760 415 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms