RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 E9PBE3 544 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 STMND1H3BQB6 276 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 KLHL41O60662 606 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 CD63P08962 238 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 IDO1P14902 403 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 SDC1P18827 310 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 CPN2P22792 545 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 TLX1P31314 330 aaPredicted RBP13.9□□□□□ -0.19
CD48-203ENST00000613788 BUD31P41223 144 aaPredicted RBP13.9□□□□□ -0.19
CD48-203ENST00000613788 ASMTP46597 345 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 RAB38P57729 211 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 TAS2R50P59544 299 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 OLR1P78380 273 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 MAT1AQ00266 395 aaKnown RBP13.9□□□□□ -0.19
CD48-203ENST00000613788 HEPACAMQ14CZ8 416 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 GSTA3Q16772 222 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 GKAP1Q5VSY0 366 aaPredicted RBP13.9□□□□□ -0.19
CD48-203ENST00000613788 TMEM132CQ8N3T6 1108 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 LIX1Q8N485 282 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 EFCAB3Q8N7B9 438 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 OR5T3Q8NGG3 340 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 OR51Q1Q8NH59 317 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.9□□□□□ -0.19
CD48-203ENST00000613788 TM4SF18Q96CE8 201 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 FAIM2Q9BWQ8 316 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 WDR41Q9HAD4 459 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 MKKSQ9NPJ1 570 aaPredicted RBP13.9□□□□□ -0.19
CD48-203ENST00000613788 ASCL3Q9NQ33 180 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 KCMF1Q9P0J7 381 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 HCN3Q9P1Z3 774 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 TRPC4Q9UBN4 977 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 ZNF282Q9UDV7 671 aaPredicted RBP13.9□□□□□ -0.19
CD48-203ENST00000613788 GPN3Q9UHW5 284 aaPredicted RBP13.9□□□□□ -0.19
CD48-203ENST00000613788 MSRB2Q9Y3D2 182 aa13.9□□□□□ -0.19
CD48-203ENST00000613788 SPTBP11277 2137 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 C9J4A7 227 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 PROM1O43490 865 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 DNAJB6O75190 326 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 ALBP02768 609 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 ALDOCP09972 364 aaKnown RBP13.89□□□□□ -0.19
CD48-203ENST00000613788 G6PDP11413 515 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 NCF2P19878 526 aaPredicted RBP13.89□□□□□ -0.19
CD48-203ENST00000613788 ITGAXP20702 1163 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 DIO3P55073 304 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 OCA2Q04671 838 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 ZNF517Q6ZMY9 492 aaPredicted RBP13.89□□□□□ -0.19
CD48-203ENST00000613788 IKBIPQ70UQ0 350 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 OVCH1Q7RTY7 1134 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 NLGN4XQ8N0W4 816 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 NLGN4YQ8NFZ3 816 aaPredicted RBP13.89□□□□□ -0.19
CD48-203ENST00000613788 CDC26Q8NHZ8 85 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 BCAS4Q8TDM0 211 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 FKBP10Q96AY3 582 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 TBC1D20Q96BZ9 403 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 PEX11GQ96HA9 241 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 ZNF578Q96N58 590 aaPredicted RBP13.89□□□□□ -0.19
CD48-203ENST00000613788 TSSK3Q96PN8 268 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 MYNNQ9NPC7 610 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 MRGBPQ9NV56 204 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 BAIAP2L1Q9UHR4 511 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 ACSL6Q9UKU0 697 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 G3BP2Q9UN86 482 aaKnown RBP13.89□□□□□ -0.19
CD48-203ENST00000613788 MAPRE3Q9UPY8 281 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 MRPS33Q9Y291 106 aaKnown RBP13.89□□□□□ -0.19
CD48-203ENST00000613788 ATG4BQ9Y4P1 393 aa13.89□□□□□ -0.19
CD48-203ENST00000613788 TEX51A0A1B0GUA7 166 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 BLACEA4D250 179 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.88□□□□□ -0.19
CD48-203ENST00000613788 NDUFAB1O14561 156 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 BRINP1O60477 761 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 ADRB1P08588 477 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 ATXN8OSP0DMR3 200 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 DRD2P14416 443 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 SPINK2P20155 84 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 TACR1P25103 407 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 XCR1P46094 333 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 HNRNPH2P55795 449 aaKnown RBP13.88□□□□□ -0.19
CD48-203ENST00000613788 STX1BP61266 288 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 C2orf80Q0P641 193 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 SYT16Q17RD7 645 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 NDUFAF5Q5TEU4 345 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 MLIPQ5VWP3 458 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 TMEM198Q66K66 360 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 TIPARPQ7Z3E1 657 aaKnown RBP13.88□□□□□ -0.19
CD48-203ENST00000613788 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.88□□□□□ -0.19
CD48-203ENST00000613788 CATSPER2Q96P56 530 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 OR1F2PQ96R84 312 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 BRINP2Q9C0B6 783 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 TGIF2Q9GZN2 237 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 CHST8Q9H2A9 424 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 PRDM9Q9NQV7 894 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 SLC22A11Q9NSA0 550 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 AIG1Q9NVV5 245 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 HEY2Q9UBP5 337 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 ARL2BPQ9Y2Y0 163 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 GPR45Q9Y5Y3 372 aa13.88□□□□□ -0.19
CD48-203ENST00000613788 IGLV3-12A0A075B6K2 115 aa13.87□□□□□ -0.19
CD48-203ENST00000613788 A0A1W2PR48 441 aa13.87□□□□□ -0.19
CD48-203ENST00000613788 C1orf226A1L170 272 aa13.87□□□□□ -0.19
CD48-203ENST00000613788 CYR61O00622 381 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms