RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 CPN1P15169 458 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 PRKCHP24723 683 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ADH7P40394 386 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 MC3RP41968 323 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 RAB1AP62820 205 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 DDX39BQ13838 428 aaKnown RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 MON1BQ7L1V2 547 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 PPP1R3BQ86XI6 285 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 PTGR2Q8N8N7 351 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 OR10H4Q8NGA5 316 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 NEIL3Q8TAT5 605 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 SHC3Q92529 594 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 DHRS4Q9BTZ2 278 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 PCDHGA5Q9Y5G8 931 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 C7orf72A4D263 438 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 CPNE6O95741 557 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 GIMD1P0DJR0 217 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 CAPN3P20807 821 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 HTR1BP28222 390 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 SUOXP51687 545 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 XKP51811 444 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 SP140Q13342 867 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 NKX1-1Q15270 411 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 SERPINA13PQ6UXR4 307 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 MARCH9Q86YJ5 346 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 OSTF1Q92882 214 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 NOL4LQ96MY1 436 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 FYTTD1Q96QD9 318 aaKnown RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 NLE1Q9NVX2 485 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 TRIM77I1YAP6 450 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 GCGRP47871 477 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 GATMP50440 423 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 KEAP1Q14145 624 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 KIAA0141Q14154 515 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 STK40Q8N2I9 435 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 USP7Q93009 1102 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 RAB7BQ96AH8 199 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 KCTD12Q96CX2 325 aaKnown RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 OR52A5Q9H2C5 316 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 SLC23A1Q9UHI7 598 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 MYO9BQ13459 2157 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 TOX4O94842 621 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 LY86O95711 162 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 MT-CYBP00156 380 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 RRASP10301 218 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 VSX2P58304 361 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 DCST1Q5T197 706 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 DCAF12L1Q5VU92 463 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 SPATC1Q76KD6 591 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 SPATA2LQ8IUW3 424 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ARMC10Q8N2F6 343 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 UBAC2Q8NBM4 344 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 FAM174AQ8TBP5 190 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 MYO19Q96H55 970 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 SLC6A7Q99884 636 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 HDHD5Q9BXW7 423 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 DCP1AQ9NPI6 582 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 OR6C2Q9NZP2 312 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 DBX1A6NMT0 343 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 FAM155AB1AL88 458 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 DPEP1P16444 411 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 CYP2B6P20813 491 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 RARRES1P49788 294 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 GTF2H5Q6ZYL4 71 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 NAT8LQ8N9F0 302 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 OR13C2Q8NGS9 318 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ADAMTS14Q8WXS8 1223 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 DYNLL2Q96FJ2 89 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 PNMA5Q96PV4 448 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 PRMT7Q9NVM4 692 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 COL3A1P02461 1466 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 FAM230AA0A1W2PPH8 454 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 DCLRE1AQ6PJP8 1040 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 SHFQ7M4L6 423 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ADGRF3Q8IZF5 1079 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ZFP82Q8N141 532 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 STPG2Q8N412 459 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 CRAMP1Q96RY5 1269 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 C11orf54Q9H0W9 315 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 FBRSL1Q9HCM7 1045 aaKnown RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 GULP1Q9UBP9 304 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 OSGIN1Q9UJX0 560 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 TLR4O00206 839 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 HOXD8P13378 290 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 ENPP1P22413 925 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 FOXO1Q12778 655 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 IFI44LQ53G44 452 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 TOR1AIP1Q5JTV8 583 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 RASGRP3Q8IV61 690 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 GHDCQ8N2G8 530 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF433Q8N7K0 673 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 CLDN22Q8N7P3 220 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 CNIH3Q8TBE1 160 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 NSMAFQ92636 917 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 WDR77Q9BQA1 342 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 ANKRD19PQ9H560 264 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 KLK4Q9Y5K2 254 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 GJA3Q9Y6H8 435 aa4.77□□□□□ -1.65
VPS13D-213ENST00000613099 COL2A1P02458 1487 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-213ENST00000613099 A0A1B0GTQ1 180 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms