RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	TIA1	P31483	386 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	GZMK	P49863	264 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	CDK6	Q00534	326 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	DDX39B	Q13838	428 aa	Known RBP	13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	VEPH1	Q14D04	833 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	LCN1P1	Q5VSP4	162 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	TRIM40	Q6P9F5	258 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	SLC24A5	Q71RS6	500 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	ZNF767P	Q75MW2	155 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	SLC30A8	Q8IWU4	369 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	PHC2	Q8IXK0	858 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	FAM109A	Q8N4B1	249 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	HJURP	Q8NCD3	748 aa	Predicted RBP	13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	OR6K2	Q8NGY2	324 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	UBASH3B	Q8TF42	649 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	SAMD11	Q96NU1	681 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	MED18	Q9BUE0	208 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	POLR2J2	Q9GZM3	115 aa	Known RBP	13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	ATG10	Q9H0Y0	220 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	FAM83D	Q9H4H8	585 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	CLEC2D	Q9UHP7	191 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	ANGPT4	Q9Y264	503 aa		13.15	□□□□□ -0.3
UBE2F-223	ENST00000612130	PIKFYVE	Q9Y2I7	2098 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	PRAMEF33	A0A0G2JMD5	474 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	MYL12B	O14950	172 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	ICMT	O60725	284 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	PRAMEF10	O60809	474 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	TBL1X	O60907	577 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	HLA-DQB1	P01920	261 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	C1QB	P02746	253 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	IFNW1	P05000	195 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	NUDT1	P36639	197 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	KIR2DL3	P43628	341 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	PCBP3	P57721	371 aa	Known RBP	13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	ZNF91	Q05481	1191 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	HNRNPA0	Q13151	305 aa	Known RBP	13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	DOC2A	Q14183	400 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	GPR19	Q15760	415 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	C12orf73	Q69YU5	71 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	ZNF852	Q6ZMS4	543 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	RFPL4B	Q6ZWI9	263 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	AP3S1	Q92572	193 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	DIRAS2	Q96HU8	199 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	IL4I1	Q96RQ9	567 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	GPR62	Q9BZJ7	368 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	UCK2	Q9BZX2	261 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	TRIM39	Q9HCM9	518 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	C11orf16	Q9NQ32	467 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	C1GALT1	Q9NS00	363 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	TXNL4B	Q9NX01	149 aa	Known RBP	13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	PLEKHB1	Q9UF11	243 aa	Predicted RBP	13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130	STOML2	Q9UJZ1	356 aa		13.14	□□□□□ -0.31
UBE2F-223	ENST00000612130		A0A1W2PQL4	384 aa	Predicted RBP	13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	TRBC2	A0A5B9	178 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130		E7EQ34	232 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	PLA2G10	O15496	165 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	CPNE3	O75131	537 aa	Known RBP	13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	TSPAN19	P0C672	248 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	ARAF	P10398	606 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	POU1F1	P28069	291 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	HOXD11	P31277	338 aa	Predicted RBP	13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	CSK	P41240	450 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	MAP2K3	P46734	347 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	SLC9A3	P48764	834 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	HBA1	P69905	142 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	NKX3-2	P78367	333 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	ILK	Q13418	452 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	SF1	Q15637	639 aa	Known RBP	13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	ATP13A5	Q4VNC0	1218 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	ZNF385B	Q569K4	471 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	CEP78	Q5JTW2	689 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	MFSD4B	Q5TF39	518 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	PLET1	Q6UQ28	207 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	THOC6	Q86W42	341 aa	Known RBP	13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	RASGRP3	Q8IV61	690 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	VRK3	Q8IV63	474 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	YIPF7	Q8N8F6	280 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	CLP1	Q92989	425 aa	Known RBP	13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	ALG14	Q96F25	216 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	BEX2	Q9BXY8	128 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	MKRN2	Q9H000	416 aa	Known RBP	13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	SYNDIG1	Q9H7V2	258 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	GKN1	Q9NS71	199 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	DNAJC27	Q9NZQ0	273 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	RNF181	Q9P0P0	153 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130		H7C4K7	107 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130		K7ERQ8	282 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	KPNA5	O15131	536 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	ETHE1	O95571	254 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	IRF1	P10914	325 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	ALAS2	P22557	587 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	GPC1	P35052	558 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	GANAB	Q14697	944 aa	Known RBP	13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	OCLN	Q16625	522 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	PYDC2	Q56P42	97 aa		13.13	□□□□□ -0.31
UBE2F-223	ENST00000612130	RETSAT	Q6NUM9	610 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms