RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ASZ1Q8WWH4 475 aa19.52■□□□□ 0.71
SSBP3-216ENST00000610401 CCL26Q9Y258 94 aa19.52■□□□□ 0.71
SSBP3-216ENST00000610401 EYSQ5T1H1 3165 aa19.52■□□□□ 0.71
SSBP3-216ENST00000610401 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.51■□□□□ 0.71
SSBP3-216ENST00000610401 C1orf226A1L170 272 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 SGTAO43765 313 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 CYP17A1P05093 508 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 URODP06132 367 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 ZNF8P17098 575 aaPredicted RBP19.51■□□□□ 0.71
SSBP3-216ENST00000610401 PSMA3P25788 255 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 HTR3AP46098 478 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 SNRPD1P62314 119 aaKnown RBP19.51■□□□□ 0.71
SSBP3-216ENST00000610401 FKBP1BP68106 108 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 BCL7BQ9BQE9 202 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 GABARAPL3Q9BY60 117 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 FAM83DQ9H4H8 585 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 IL20RAQ9UHF4 553 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 PLK4O00444 970 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 IFI30P13284 250 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 IL1RNP18510 177 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 PTPN5P54829 565 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 HNRNPA0Q13151 305 aaKnown RBP19.51■□□□□ 0.71
SSBP3-216ENST00000610401 PIN1Q13526 163 aaPredicted RBP19.51■□□□□ 0.71
SSBP3-216ENST00000610401 MPEG1Q2M385 716 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 OR2G6Q5TZ20 316 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 TYW3Q6IPR3 259 aaKnown RBP19.51■□□□□ 0.71
SSBP3-216ENST00000610401 B3GLCTQ6Y288 498 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 TRMT11Q7Z4G4 463 aaKnown RBP19.51■□□□□ 0.71
SSBP3-216ENST00000610401 OR6F1Q8NGZ6 308 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 DIRAS2Q96HU8 199 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 TM9SF2Q99805 663 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 COMMD3Q9UBI1 195 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 GPSM3Q9Y4H4 160 aa19.51■□□□□ 0.71
SSBP3-216ENST00000610401 ANXA8P13928 327 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 XPAP23025 273 aaPredicted RBP19.5■□□□□ 0.71
SSBP3-216ENST00000610401 RUNX1T1Q06455 604 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 TARDBPQ13148 414 aaKnown RBP eCLIP19.5■□□□□ 0.711e-6■■■□□ 15.9
SSBP3-216ENST00000610401 VEZF1Q14119 521 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 SEC23BQ15437 767 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 TMEM220Q6QAJ8 160 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 CEACAM20Q6UY09 585 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 TMEM25Q86YD3 366 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 GALNT13Q8IUC8 556 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 FAM9CQ8IZT9 166 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 HCN4Q9Y3Q4 1203 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 CLCA3PQ9Y6N3 262 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 COL4A4P53420 1690 aaPredicted RBP19.5■□□□□ 0.71
SSBP3-216ENST00000610401 A0A1B0GVC2 190 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 A6NIN4 97 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 C5orf58C9J3I9 102 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 TSC22D2O75157 780 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 IL3P08700 152 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 HNMTP50135 292 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 LIM2P55344 173 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 PYDC2Q56P42 97 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 CCSAPQ6IQ19 270 aaPredicted RBP19.5■□□□□ 0.71
SSBP3-216ENST00000610401 TRAPPC5Q8IUR0 188 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 LACC1Q8IV20 430 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 C1GALT1C1Q96EU7 318 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 OR2A14Q96R47 310 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 FADS2P1A8MWK0 482 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 CPNE3O75131 537 aaKnown RBP19.5■□□□□ 0.71
SSBP3-216ENST00000610401 IMPA1P29218 277 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 INSL4Q14641 139 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 SMU1Q2TAY7 513 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 FRMPD2BQ6IN97 320 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 UCN3Q969E3 161 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 OPALINQ96PE5 141 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 MCCC1Q96RQ3 725 aaPredicted RBP19.5■□□□□ 0.71
SSBP3-216ENST00000610401 HHATLQ9HCP6 504 aa19.5■□□□□ 0.71
SSBP3-216ENST00000610401 HOXC11O43248 304 aaPredicted RBP19.49■□□□□ 0.71
SSBP3-216ENST00000610401 CH25HO95992 272 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 PAX3P23760 479 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 UGT2B10P36537 528 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 MLLT1Q03111 559 aaPredicted RBP19.49■□□□□ 0.71
SSBP3-216ENST00000610401 SPDYE7PQ495Y7 208 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 ARSIQ5FYB1 569 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 LYPLAL1Q5VWZ2 237 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 PADI2Q9Y2J8 665 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 A0A1W2PRB8 838 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 MANSC4A6NHS7 340 aaPredicted RBP19.49■□□□□ 0.71
SSBP3-216ENST00000610401 GLOD5A6NK44 160 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 TLR4O00206 839 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 CRISP1P54107 249 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 PRKCDQ05655 676 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 GPNMBQ14956 572 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 CLEC12AQ5QGZ9 265 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 USP30Q70CQ3 517 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 NLGN4YQ8NFZ3 816 aaPredicted RBP19.49■□□□□ 0.71
SSBP3-216ENST00000610401 TRPV5Q9NQA5 729 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 DYRK4Q9NR20 520 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 CFL2Q9Y281 166 aa19.49■□□□□ 0.71
SSBP3-216ENST00000610401 NCR1O76036 304 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 SLITRK5O94991 958 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 TIA1P31483 386 aaKnown RBP eCLIP19.48■□□□□ 0.718e-7■■■■■ 30.6
SSBP3-216ENST00000610401 METAP1P53582 386 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 MVDP53602 400 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 ASTLQ6HA08 431 aaPredicted RBP19.48■□□□□ 0.71
SSBP3-216ENST00000610401 C22orf39Q6P5X5 142 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 RAB43Q86YS6 212 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms