RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 TMEM151BQ8IW70 566 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 ZNF595Q8IYB9 648 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 PRSS58Q8IYP2 241 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 KIRREL3Q8IZU9 778 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 RAB3IL1Q8TBN0 382 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 METTL2AQ96IZ6 378 aaKnown RBP13.08□□□□□ -0.32
RNF40-212ENST00000602784 ACPTQ9BZG2 426 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 SHCBP1LQ9BZQ2 653 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 MRPS33Q9Y291 106 aaKnown RBP13.08□□□□□ -0.32
RNF40-212ENST00000602784 MMACHCQ9Y4U1 282 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 HS3ST3B1Q9Y662 390 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 SPACA6W5XKT8 324 aa13.08□□□□□ -0.32
RNF40-212ENST00000602784 LOC102723996A0A087X1L8 192 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 SYNDIG1LA6NDD5 238 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 NPIPB8E9PQR5 432 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 CLDN4O14493 209 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 SOCS6O14544 535 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 PRMT3O60678 531 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 ALOX12BO75342 701 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 EEDO75530 441 aaKnown RBP13.07□□□□□ -0.32
RNF40-212ENST00000602784 HSPA4LO95757 839 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 CHEK2O96017 543 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 NEFHP12036 1026 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 SERPINB3P29508 390 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 HTR6P50406 440 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 RRADP55042 308 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 HSD17B7P56937 341 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 ABCE1P61221 599 aaKnown RBP13.07□□□□□ -0.32
RNF40-212ENST00000602784 STX3Q13277 289 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 SLAMF1Q13291 335 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 DEFB109BQ30KR1 87 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 UGT3A2Q3SY77 523 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 MINDY4Q4G0A6 757 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 CES4AQ5XG92 561 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 CLEC6AQ6EIG7 209 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 BORAQ6PGQ7 559 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 KIRREL2Q6UWL6 708 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 COMMD6Q7Z4G1 85 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 GPR180Q86V85 440 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 APLFQ8IW19 511 aaPredicted RBP13.07□□□□□ -0.32
RNF40-212ENST00000602784 TRIM42Q8IWZ5 723 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 SHISA5Q8N114 240 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 TMEM102Q8N9M5 508 aaPredicted RBP13.07□□□□□ -0.32
RNF40-212ENST00000602784 C7orf57Q8NEG2 295 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 CHTF18Q8WVB6 975 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 APOBEC4Q8WW27 367 aaKnown RBP13.07□□□□□ -0.32
RNF40-212ENST00000602784 METTL21AQ8WXB1 218 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 C11orf24Q96F05 449 aaPredicted RBP13.07□□□□□ -0.32
RNF40-212ENST00000602784 FER1L6-AS2Q96M78 137 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 HBEGFQ99075 208 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 CCT7Q99832 543 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 PAIP2Q9BPZ3 127 aaKnown RBP13.07□□□□□ -0.32
RNF40-212ENST00000602784 MAPKAP1Q9BPZ7 522 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 SORBS1Q9BX66 1292 aaKnown RBP13.07□□□□□ -0.32
RNF40-212ENST00000602784 MRPL1Q9BYD6 325 aaKnown RBP13.07□□□□□ -0.32
RNF40-212ENST00000602784 MLXIPLQ9NP71 852 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 LYARQ9NX58 379 aaKnown RBP13.07□□□□□ -0.32
RNF40-212ENST00000602784 SIRT5Q9NXA8 310 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 P4HTMQ9NXG6 502 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 PHF11Q9UIL8 331 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 HAO1Q9UJM8 370 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 MAN2B2Q9Y2E5 1009 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 DNAJC15Q9Y5T4 150 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 KCNMB2Q9Y691 235 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 CACNA1GO43497 2377 aa13.07□□□□□ -0.32
RNF40-212ENST00000602784 FAM227AF5H4B4 570 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 SLC28A1O00337 649 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 PROM1O43490 865 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 B4GALT2O60909 372 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 FAM58BPP0C7Q3 252 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 C8orf89P0DMQ9 161 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 ACPPP15309 386 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 CHN1P15882 459 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 BGNP21810 368 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 PRPH2P23942 346 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 SLC1A6P48664 564 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 EFNA3P52797 238 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 ATP1A4Q13733 1029 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 NSDHLQ15738 373 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 TBR1Q16650 682 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 SPIN4Q56A73 249 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 SH2D4BQ5SQS7 431 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 MFSD4BQ5TF39 518 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 GALNT18Q6P9A2 607 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 CYP20A1Q6UW02 462 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 ATG14Q6ZNE5 492 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 OR11G2Q8NGC1 345 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 MGARPQ8TDB4 240 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 ILKAPQ9H0C8 392 aaPredicted RBP13.06□□□□□ -0.32
RNF40-212ENST00000602784 PRDM9Q9NQV7 894 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 C19orf25Q9UFG5 118 aaPredicted RBP13.06□□□□□ -0.32
RNF40-212ENST00000602784 ZDHHC2Q9UIJ5 367 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 RAP2CQ9Y3L5 183 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 CCL27Q9Y4X3 112 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 ASB4Q9Y574 426 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 LOC400499M0QZD8 3231 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 NUP210LQ5VU65 1888 aa13.06□□□□□ -0.32
RNF40-212ENST00000602784 NBEAQ8NFP9 2946 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 IGKV3D-11A0A0A0MRZ8 115 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 ARHGAP10A1A4S6 786 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms