RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 TRA2AQ13595 282 aaKnown RBP eCLIP21.4■■□□□ 1.02
IRF3-228ENST00000601291 MUM1Q2TAK8 710 aa21.4■■□□□ 1.02
IRF3-228ENST00000601291 C6orf10Q5SRN2 563 aa21.4■■□□□ 1.02
IRF3-228ENST00000601291 PHF19Q5T6S3 580 aa21.4■■□□□ 1.02
IRF3-228ENST00000601291 DHDDSQ86SQ9 333 aa21.4■■□□□ 1.02
IRF3-228ENST00000601291 TICAM1Q8IUC6 712 aa21.4■■□□□ 1.02
IRF3-228ENST00000601291 ARHGEF39Q8N4T4 335 aa21.4■■□□□ 1.02
IRF3-228ENST00000601291 ZNF764Q96H86 408 aaPredicted RBP21.4■■□□□ 1.02
IRF3-228ENST00000601291 CADM1Q9BY67 442 aaKnown RBP21.4■■□□□ 1.02
IRF3-228ENST00000601291 MMADHCQ9H3L0 296 aaPredicted RBP21.4■■□□□ 1.02
IRF3-228ENST00000601291 MS4A12Q9NXJ0 267 aa21.4■■□□□ 1.02
IRF3-228ENST00000601291 SERTAD3Q9UJW9 196 aa21.4■■□□□ 1.02
IRF3-228ENST00000601291 SPACA6W5XKT8 324 aa21.4■■□□□ 1.02
IRF3-228ENST00000601291 VPS13AQ96RL7 3174 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 C1orf226A1L170 272 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 CBFA2T3O75081 653 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 BUD31P41223 144 aaPredicted RBP21.39■■□□□ 1.01
IRF3-228ENST00000601291 ITGA1P56199 1179 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 FOXM1Q08050 763 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 FAM53BQ14153 422 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 FAM214AQ32MH5 1076 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 PRMT9Q6P2P2 845 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 SLITRK4Q8IW52 837 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 NATD1Q8N6N6 113 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 RCBTB1Q8NDN9 531 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 C10orf90Q96M02 699 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 HOPXQ9BPY8 73 aaPredicted RBP21.39■■□□□ 1.01
IRF3-228ENST00000601291 MAPKAP1Q9BPZ7 522 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 NPLQ9BXD5 320 aaPredicted RBP21.39■■□□□ 1.01
IRF3-228ENST00000601291 SPRTNQ9H040 489 aaPredicted RBP21.39■■□□□ 1.01
IRF3-228ENST00000601291 IL1RL2Q9HB29 575 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 LYRM4Q9HD34 91 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 FGF21Q9NSA1 209 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 EHD3Q9NZN3 535 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 HCN4Q9Y3Q4 1203 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 ATG4BQ9Y4P1 393 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 GPR179Q6PRD1 2367 aa21.39■■□□□ 1.01
IRF3-228ENST00000601291 PGM1P36871 562 aa21.38■■□□□ 1.01
IRF3-228ENST00000601291 PSME3P61289 254 aa21.38■■□□□ 1.01
IRF3-228ENST00000601291 SNRPNP63162 240 aaKnown RBP21.38■■□□□ 1.01
IRF3-228ENST00000601291 KCNJ2P63252 427 aa21.38■■□□□ 1.01
IRF3-228ENST00000601291 PHC1P78364 1004 aa21.38■■□□□ 1.01
IRF3-228ENST00000601291 TLDC1Q6P9B6 456 aa21.38■■□□□ 1.01
IRF3-228ENST00000601291 PRSS41Q7RTY9 318 aa21.38■■□□□ 1.01
IRF3-228ENST00000601291 PDSS2Q86YH6 399 aa21.38■■□□□ 1.01
IRF3-228ENST00000601291 GTF2H4Q92759 462 aa21.38■■□□□ 1.01
IRF3-228ENST00000601291 LRRC58Q96CX6 371 aa21.38■■□□□ 1.01
IRF3-228ENST00000601291 PRPF19Q9UMS4 504 aaKnown RBP21.38■■□□□ 1.01
IRF3-228ENST00000601291 DAPP1Q9UN19 280 aa21.38■■□□□ 1.01
IRF3-228ENST00000601291 MAN2B2Q9Y2E5 1009 aa21.38■■□□□ 1.01
IRF3-228ENST00000601291 PCDHA9Q9Y5H5 950 aa21.38■■□□□ 1.01
IRF3-228ENST00000601291 RP1P56715 2156 aa21.38■■□□□ 1.01
IRF3-228ENST00000601291 CACNA1HO95180 2353 aa21.38■■□□□ 1.01
IRF3-228ENST00000601291 PRSS51A0A1B0GVH4 220 aa21.37■■□□□ 1.01
IRF3-228ENST00000601291 A0A1W2PR48 441 aa21.37■■□□□ 1.01
IRF3-228ENST00000601291 ZNF860A6NHJ4 632 aa21.37■■□□□ 1.01
IRF3-228ENST00000601291 PROM1O43490 865 aa21.37■■□□□ 1.01
IRF3-228ENST00000601291 AIFM1O95831 613 aa21.37■■□□□ 1.01
IRF3-228ENST00000601291 NR2F6P10588 404 aa21.37■■□□□ 1.01
IRF3-228ENST00000601291 NQO1P15559 274 aaKnown RBP21.37■■□□□ 1.01
IRF3-228ENST00000601291 CPN2P22792 545 aa21.37■■□□□ 1.01
IRF3-228ENST00000601291 TLX1P31314 330 aaPredicted RBP21.37■■□□□ 1.01
IRF3-228ENST00000601291 LIM2P55344 173 aa21.37■■□□□ 1.01
IRF3-228ENST00000601291 TNFRSF17Q02223 184 aa21.37■■□□□ 1.01
IRF3-228ENST00000601291 ILKQ13418 452 aa21.37■■□□□ 1.01
IRF3-228ENST00000601291 ZNF385BQ569K4 471 aa21.37■■□□□ 1.01
IRF3-228ENST00000601291 BNC2Q6ZN30 1099 aaPredicted RBP21.37■■□□□ 1.01
IRF3-228ENST00000601291 ANKRD46Q86W74 232 aa21.37■■□□□ 1.01
IRF3-228ENST00000601291 MMP21Q8N119 569 aa21.37■■□□□ 1.01
IRF3-228ENST00000601291 OR1L3Q8NH93 324 aa21.37■■□□□ 1.01
IRF3-228ENST00000601291 ZNF501Q96CX3 271 aaPredicted RBP21.37■■□□□ 1.01
IRF3-228ENST00000601291 THTPAQ9BU02 230 aa21.37■■□□□ 1.01
IRF3-228ENST00000601291 C15orf38-AP3S2A0A0A6YYH1 394 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 RNASET2O00584 256 aaKnown RBP21.36■■□□□ 1.01
IRF3-228ENST00000601291 RFXANKO14593 260 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 ERN1O75460 977 aaKnown RBP21.36■■□□□ 1.01
IRF3-228ENST00000601291 NSA2O95478 260 aaKnown RBP21.36■■□□□ 1.01
IRF3-228ENST00000601291 TGM1P22735 817 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 AVPR1BP47901 424 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 WNT3P56703 355 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 PLIN5Q00G26 463 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 RUNX2Q13950 521 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 ARPINQ7Z6K5 226 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 FAM47BQ8NA70 645 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 OR9A4Q8NGU2 314 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 SPAG4Q9NPE6 437 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 CUTCQ9NTM9 273 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 BTNL2Q9UIR0 455 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 RRP15Q9Y3B9 282 aaKnown RBP21.36■■□□□ 1.01
IRF3-228ENST00000601291 PCDHGA7Q9Y5G6 932 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 A0A096LPI6 279 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 A0A0A6YYC8 382 aaPredicted RBP21.36■■□□□ 1.01
IRF3-228ENST00000601291 H3BMH7 237 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 I3L1I5 382 aaPredicted RBP21.36■■□□□ 1.01
IRF3-228ENST00000601291 SGK494L7N484 410 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 FXYD1O00168 92 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 RDH16O75452 317 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 ANP32DO95626 131 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 CSTF2P33240 577 aaKnown RBP eCLIP21.36■■□□□ 1.01
IRF3-228ENST00000601291 OLR1P78380 273 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms