RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 UQCRHLA0A096LP55 91 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 SYNDIG1LA6NDD5 238 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 ERVH48-1M5A8F1 160 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 CHRNGP07510 517 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 HEXBP07686 556 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 UQCRHP07919 91 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 PRKAR1AP10644 381 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 PRPH2P23942 346 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 SSR2P43308 183 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 RAP1GDS1P52306 607 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 HSD17B7P56937 341 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 LINC00303Q3SY05 128 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 FAM219BQ5XKK7 198 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 KANK2Q63ZY3 851 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 GALNT18Q6P9A2 607 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 BORAQ6PGQ7 559 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 SHISA6Q6ZSJ9 500 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 ZCCHC23Q6ZST2 131 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 NUDT13Q86X67 352 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 ZNF595Q8IYB9 648 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 LSM14AQ8ND56 463 aaKnown RBP13.75□□□□□ -0.21
LTBP4-228ENST00000600499 OR11G2Q8NGC1 345 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 RAB3IL1Q8TBN0 382 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 APOBEC4Q8WW27 367 aaKnown RBP13.75□□□□□ -0.21
LTBP4-228ENST00000600499 MAPKAP1Q9BPZ7 522 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 YIPF2Q9BWQ6 316 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 ACPTQ9BZG2 426 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 PRDM9Q9NQV7 894 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 LYARQ9NX58 379 aaKnown RBP13.75□□□□□ -0.21
LTBP4-228ENST00000600499 P4HTMQ9NXG6 502 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.75□□□□□ -0.21
LTBP4-228ENST00000600499 ASB4Q9Y574 426 aa13.75□□□□□ -0.21
LTBP4-228ENST00000600499 SAP18O00422 153 aaKnown RBP13.74□□□□□ -0.21
LTBP4-228ENST00000600499 SH3BGRLO75368 114 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 EEDO75530 441 aaKnown RBP13.74□□□□□ -0.21
LTBP4-228ENST00000600499 CEACAM4O75871 244 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 CHN1P15882 459 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 TPP2P29144 1249 aaPredicted RBP13.74□□□□□ -0.21
LTBP4-228ENST00000600499 OTX2P32243 289 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 RRADP55042 308 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 SLAMF1Q13291 335 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 ATP1A4Q13733 1029 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 CHI3L2Q15782 390 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 DEFB109BQ30KR1 87 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 SGO1Q5FBB7 561 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 HHATQ5VTY9 493 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 PCSK4Q6UW60 755 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 PAGE2Q7Z2X7 111 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 C7orf57Q8NEG2 295 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 FER1L6-AS2Q96M78 137 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 SORBS1Q9BX66 1292 aaKnown RBP13.74□□□□□ -0.21
LTBP4-228ENST00000600499 MRPL1Q9BYD6 325 aaKnown RBP13.74□□□□□ -0.21
LTBP4-228ENST00000600499 NKIRAS1Q9NYS0 192 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 PHF11Q9UIL8 331 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 TUBD1Q9UJT1 453 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 SLC12A4Q9UP95 1085 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 LHX6Q9UPM6 363 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 MRPS33Q9Y291 106 aaKnown RBP13.74□□□□□ -0.21
LTBP4-228ENST00000600499 MAN2B2Q9Y2E5 1009 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 TRAF6Q9Y4K3 522 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 DNAJC15Q9Y5T4 150 aa13.74□□□□□ -0.21
LTBP4-228ENST00000600499 IGHV1-45A0A0A0MS14 117 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 TCRBV16S1A1N1A0A5B0 115 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 FAM227AF5H4B4 570 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 PSMD12O00232 456 aaPredicted RBP13.73□□□□□ -0.21
LTBP4-228ENST00000600499 PEX12O00623 359 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 KLF11O14901 512 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 PROM1O43490 865 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 ATP8B1O43520 1251 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 TMPRSS11DO60235 418 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 PRMT3O60678 531 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 CTNSO60931 367 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 RSL1D1O76021 490 aaKnown RBP13.73□□□□□ -0.21
LTBP4-228ENST00000600499 HPP00738 406 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 C8orf89P0DMQ9 161 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 COX6A1P12074 109 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 ACPPP15309 386 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 SERPINB3P29508 390 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 HNRNPH2P55795 449 aaKnown RBP13.73□□□□□ -0.21
LTBP4-228ENST00000600499 ABCE1P61221 599 aaKnown RBP13.73□□□□□ -0.21
LTBP4-228ENST00000600499 TRA2BP62995 288 aaKnown RBP13.73□□□□□ -0.21
LTBP4-228ENST00000600499 IGLV3-21P80748 117 aaPredicted RBP13.73□□□□□ -0.21
LTBP4-228ENST00000600499 PCOLCEQ15113 449 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 SPIN4Q56A73 249 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 DCAF10Q5QP82 559 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 CLEC6AQ6EIG7 209 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 Q6ZSR9 355 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 NDUFAF7Q7L592 441 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 COMMD6Q7Z4G1 85 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 ANKRD37Q7Z713 158 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 GPR180Q86V85 440 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 PRSS58Q8IYP2 241 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 KIRREL3Q8IZU9 778 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 ANKRD42Q8N9B4 389 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 TMEM52Q8NDY8 209 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 FAM76AQ8TAV0 307 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 IMMP1LQ96LU5 166 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 CSF3RQ99062 836 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 HBEGFQ99075 208 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 SORT1Q99523 831 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms